Gene : Glyma.20G217800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24006:SF526 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10-RELATED Genomic Order:  2178
Name:  ? Glyma.20G217800 Secondary Identifier:  ? PAC:30522199
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G217800 0.5kb upstream 0.5kb upstream 10659 true Chr20: 45369472-45380130 Glycine max
Glyma.20G217800 0.5kb upstream 0.5kb upstream 500 false Chr20: 45369472-45369971 Glycine max
Glyma.20G217800 0.5kb downstream 0.5kb downstream 10659 true Chr20: 45369972-45380630 Glycine max
Glyma.20G217800 0.5kb downstream 0.5kb downstream 500 false Chr20: 45380131-45380630 Glycine max
Glyma.20G217800 1.0kb upstream 1.0kb upstream 11159 true Chr20: 45368972-45380130 Glycine max
Glyma.20G217800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45368972-45369971 Glycine max
Glyma.20G217800 1.0kb downstream 1.0kb downstream 11159 true Chr20: 45369972-45381130 Glycine max
Glyma.20G217800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45380131-45381130 Glycine max
Glyma.20G217800 2.0kb upstream 2.0kb upstream 12159 true Chr20: 45367972-45380130 Glycine max
Glyma.20G217800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45367972-45369971 Glycine max
Glyma.20G217800 2.0kb downstream 2.0kb downstream 12159 true Chr20: 45369972-45382130 Glycine max
Glyma.20G217800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45380131-45382130 Glycine max
Glyma.20G217800 5.0kb upstream 5.0kb upstream 15159 true Chr20: 45364972-45380130 Glycine max
Glyma.20G217800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45364972-45369971 Glycine max
Glyma.20G217800 5.0kb downstream 5.0kb downstream 15159 true Chr20: 45369972-45385130 Glycine max
Glyma.20G217800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45380131-45385130 Glycine max
Glyma.20G217800 10.0kb upstream 10.0kb upstream 20159 true Chr20: 45359972-45380130 Glycine max
Glyma.20G217800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45359972-45369971 Glycine max
Glyma.20G217800 10.0kb downstream 10.0kb downstream 20159 true Chr20: 45369972-45390130 Glycine max
Glyma.20G217800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45380131-45390130 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303511 5265 Fabidae View MSA
124063277 5270 Rosid View MSA
123740103 5271 Pentapetalae View MSA
122793775 5272 Eudicot View MSA
122043130 5273 Angiosperm View MSA
121310077 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.51925 0.0 22.7283    
cufflinks 7.06297 0.0 18.8776   Low
cufflinks 11.3404 0.0 30.42   High
cufflinks 7.56463 0.0 20.1949    
cufflinks 9.97267 0.0 26.6315    
cufflinks 7.57848 0.0 20.2315    
cufflinks 10.5827 0.0 28.2892   High
cufflinks 7.16818 0.0 19.1527   Low
cufflinks 9.45254 0.0 25.2311    
cufflinks 3.755        
cufflinks 2.923       Low
cufflinks 4.718        
cufflinks 4.968       High
cufflinks 6.088       High
cufflinks 3.845        
cufflinks 3.074        
cufflinks 2.743       Low
cufflinks 4.963       High
cufflinks 4.354        
cufflinks 3.107        
cufflinks 4.216        
cufflinks 3.42        
cufflinks 3.064        
cufflinks 4.452        
cufflinks 3.261        
cufflinks 3.342        

0 Strain