Gene : Glyma.20G214100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15856//PTHR15856:SF29 - PHD FINGER PROTEIN 20-RELATED Genomic Order:  2141
Name:  ? Glyma.20G214100 Secondary Identifier:  ? PAC:30520966
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G214100 0.5kb upstream 0.5kb upstream 5607 true Chr20: 45020794-45026400 Glycine max
Glyma.20G214100 0.5kb upstream 0.5kb upstream 500 false Chr20: 45020794-45021293 Glycine max
Glyma.20G214100 0.5kb downstream 0.5kb downstream 5607 true Chr20: 45021294-45026900 Glycine max
Glyma.20G214100 0.5kb downstream 0.5kb downstream 500 false Chr20: 45026401-45026900 Glycine max
Glyma.20G214100 1.0kb upstream 1.0kb upstream 6107 true Chr20: 45020294-45026400 Glycine max
Glyma.20G214100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 45020294-45021293 Glycine max
Glyma.20G214100 1.0kb downstream 1.0kb downstream 6107 true Chr20: 45021294-45027400 Glycine max
Glyma.20G214100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 45026401-45027400 Glycine max
Glyma.20G214100 2.0kb upstream 2.0kb upstream 7107 true Chr20: 45019294-45026400 Glycine max
Glyma.20G214100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 45019294-45021293 Glycine max
Glyma.20G214100 2.0kb downstream 2.0kb downstream 7107 true Chr20: 45021294-45028400 Glycine max
Glyma.20G214100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 45026401-45028400 Glycine max
Glyma.20G214100 5.0kb upstream 5.0kb upstream 10107 true Chr20: 45016294-45026400 Glycine max
Glyma.20G214100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 45016294-45021293 Glycine max
Glyma.20G214100 5.0kb downstream 5.0kb downstream 10107 true Chr20: 45021294-45031400 Glycine max
Glyma.20G214100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 45026401-45031400 Glycine max
Glyma.20G214100 10.0kb upstream 10.0kb upstream 15107 true Chr20: 45011294-45026400 Glycine max
Glyma.20G214100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 45011294-45021293 Glycine max
Glyma.20G214100 10.0kb downstream 10.0kb downstream 15107 true Chr20: 45021294-45036400 Glycine max
Glyma.20G214100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 45026401-45036400 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303151 5265 Fabidae View MSA
124069901 5270 Rosid View MSA
123741706 5271 Pentapetalae View MSA
122793317 5272 Eudicot View MSA
122047427 5273 Angiosperm View MSA
121310739 5274 Embryophyte View MSA
123348151 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5641 0.0 51.3812    
cufflinks 9.65143 0.0 34.3482   Low
cufflinks 22.4857 0.0 80.7734 High High
cufflinks 18.1158 0.0 71.3046    
cufflinks 12.6568 0.0 48.5922    
cufflinks 12.611 0.0 47.5507    
cufflinks 21.3681 0.0 74.4512   High
cufflinks 11.0817 0.0 42.0029    
cufflinks 11.0938 0.0 39.2325    
cufflinks 1.031       Low
cufflinks 1.258        
cufflinks 2.364       High
cufflinks 1.228        
cufflinks 1.35        
cufflinks 2.199       High
cufflinks 1.246        
cufflinks 0.863       Low
cufflinks 1.78        
cufflinks 1.774        
cufflinks 1.563        
cufflinks 0.914       Low
cufflinks 1.488        
cufflinks 1.186        
cufflinks 1.562        
cufflinks 1.601        
cufflinks 1.311        

0 Strain