Gene : Glyma.20G239500 G. max Wm82.a2.v1
Defline:  (1 of 26) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  2395
Name:  ? Glyma.20G239500 Secondary Identifier:  ? PAC:30520847
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G239500 0.5kb upstream 0.5kb upstream 2189 true Chr20: 47103316-47105504 Glycine max
Glyma.20G239500 0.5kb upstream 0.5kb upstream 500 false Chr20: 47103316-47103815 Glycine max
Glyma.20G239500 0.5kb downstream 0.5kb downstream 2189 true Chr20: 47103816-47106004 Glycine max
Glyma.20G239500 0.5kb downstream 0.5kb downstream 500 false Chr20: 47105505-47106004 Glycine max
Glyma.20G239500 1.0kb upstream 1.0kb upstream 2689 true Chr20: 47102816-47105504 Glycine max
Glyma.20G239500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47102816-47103815 Glycine max
Glyma.20G239500 1.0kb downstream 1.0kb downstream 2689 true Chr20: 47103816-47106504 Glycine max
Glyma.20G239500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47105505-47106504 Glycine max
Glyma.20G239500 2.0kb upstream 2.0kb upstream 3689 true Chr20: 47101816-47105504 Glycine max
Glyma.20G239500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47101816-47103815 Glycine max
Glyma.20G239500 2.0kb downstream 2.0kb downstream 3689 true Chr20: 47103816-47107504 Glycine max
Glyma.20G239500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47105505-47107504 Glycine max
Glyma.20G239500 5.0kb upstream 5.0kb upstream 6689 true Chr20: 47098816-47105504 Glycine max
Glyma.20G239500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47098816-47103815 Glycine max
Glyma.20G239500 5.0kb downstream 5.0kb downstream 6689 true Chr20: 47103816-47110504 Glycine max
Glyma.20G239500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47105505-47110504 Glycine max
Glyma.20G239500 10.0kb upstream 10.0kb upstream 11689 true Chr20: 47093816-47105504 Glycine max
Glyma.20G239500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47093816-47103815 Glycine max
Glyma.20G239500 10.0kb downstream 10.0kb downstream 11689 true Chr20: 47103816-47115504 Glycine max
Glyma.20G239500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47105505-47115504 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301886 5265 Fabidae View MSA
124062410 5270 Rosid View MSA
123751104 5271 Pentapetalae View MSA
122786084 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01349 0.0 3.58872   Low
cufflinks 10.8612 0.0 29.433   High
cufflinks 4.84828 0.0 14.2536    
cufflinks 8.79183 0.0 24.1451    
cufflinks 7.31742 0.0 20.3113    
cufflinks 3.64077 0.0 11.0423    
cufflinks 3.2373 0.0 9.96118    
cufflinks 10.0283 0.0 27.256    
cufflinks 3.74368 0.0 11.2949    
cufflinks 14.586     High High
cufflinks 1.202       Low
cufflinks 5.272        
cufflinks 5.983        
cufflinks 8.4     High High
cufflinks 0.505       Low
cufflinks 3.591        
cufflinks 1.333        
cufflinks 11.298     High High
cufflinks 10.847     High High
cufflinks 2.245        
cufflinks 1.27        
cufflinks 2.622        
cufflinks 3.504        
cufflinks 1.408        
cufflinks 2.542        
cufflinks 2.113        

0 Strain