Gene : Glyma.20G243400 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG1380 - Heme A farnesyltransferase Genomic Order:  2434
Name:  ? Glyma.20G243400 Secondary Identifier:  ? PAC:30521750
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G243400 0.5kb upstream 0.5kb upstream 4989 true Chr20: 47383712-47388700 Glycine max
Glyma.20G243400 0.5kb upstream 0.5kb upstream 500 false Chr20: 47388201-47388700 Glycine max
Glyma.20G243400 0.5kb downstream 0.5kb downstream 4989 true Chr20: 47383212-47388200 Glycine max
Glyma.20G243400 0.5kb downstream 0.5kb downstream 500 false Chr20: 47383212-47383711 Glycine max
Glyma.20G243400 1.0kb upstream 1.0kb upstream 5489 true Chr20: 47383712-47389200 Glycine max
Glyma.20G243400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47388201-47389200 Glycine max
Glyma.20G243400 1.0kb downstream 1.0kb downstream 5489 true Chr20: 47382712-47388200 Glycine max
Glyma.20G243400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47382712-47383711 Glycine max
Glyma.20G243400 2.0kb upstream 2.0kb upstream 6489 true Chr20: 47383712-47390200 Glycine max
Glyma.20G243400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47388201-47390200 Glycine max
Glyma.20G243400 2.0kb downstream 2.0kb downstream 6489 true Chr20: 47381712-47388200 Glycine max
Glyma.20G243400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47381712-47383711 Glycine max
Glyma.20G243400 5.0kb upstream 5.0kb upstream 9489 true Chr20: 47383712-47393200 Glycine max
Glyma.20G243400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47388201-47393200 Glycine max
Glyma.20G243400 5.0kb downstream 5.0kb downstream 9489 true Chr20: 47378712-47388200 Glycine max
Glyma.20G243400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47378712-47383711 Glycine max
Glyma.20G243400 10.0kb upstream 10.0kb upstream 14489 true Chr20: 47383712-47398200 Glycine max
Glyma.20G243400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47388201-47398200 Glycine max
Glyma.20G243400 10.0kb downstream 10.0kb downstream 14489 true Chr20: 47373712-47388200 Glycine max
Glyma.20G243400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47373712-47383711 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315294 5265 Fabidae View MSA
124065893 5270 Rosid View MSA
123737937 5271 Pentapetalae View MSA
122790266 5272 Eudicot View MSA
122046986 5273 Angiosperm View MSA
121346504 5274 Embryophyte View MSA
123428600 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.7308 0.0 65.9795 High  
cufflinks 10.5406 0.0 29.2012   Low
cufflinks 14.0538 0.0 38.1073    
cufflinks 12.6618 0.0 34.5657    
cufflinks 23.408 0.0 62.4593 High  
cufflinks 32.2756 0.0 86.4426 High High
cufflinks 12.2564 0.0 33.51    
cufflinks 14.0694 0.0 38.1625    
cufflinks 19.2715 0.0 51.5742    
cufflinks 5.292        
cufflinks 3.411        
cufflinks 3.013        
cufflinks 9.364     High High
cufflinks 9.21     High High
cufflinks 3.631        
cufflinks 3.423        
cufflinks 4.873        
cufflinks 3.222        
cufflinks 3.516        
cufflinks 3.032        
cufflinks 4.256        
cufflinks 3.347        
cufflinks 3.926        
cufflinks 4.286        
cufflinks 2.943        
cufflinks 5.086        

0 Strain