Gene : Glyma.20G243500 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.2.1.1//2.2.1.2 - Transketolase / Glycoaldehyde transferase // Transaldolase / Glycerone transferase Genomic Order:  2435
Name:  ? Glyma.20G243500 Secondary Identifier:  ? PAC:30520132
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CALVIN-PWY Glycine max pathologic  
Gmax NONOXIPENT-PWY Glycine max pathologic  
Gmax PENTOSE-P-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G243500 0.5kb upstream 0.5kb upstream 4491 true Chr20: 47390585-47395075 Glycine max
Glyma.20G243500 0.5kb upstream 0.5kb upstream 500 false Chr20: 47390585-47391084 Glycine max
Glyma.20G243500 0.5kb downstream 0.5kb downstream 4491 true Chr20: 47391085-47395575 Glycine max
Glyma.20G243500 0.5kb downstream 0.5kb downstream 500 false Chr20: 47395076-47395575 Glycine max
Glyma.20G243500 1.0kb upstream 1.0kb upstream 4991 true Chr20: 47390085-47395075 Glycine max
Glyma.20G243500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47390085-47391084 Glycine max
Glyma.20G243500 1.0kb downstream 1.0kb downstream 4991 true Chr20: 47391085-47396075 Glycine max
Glyma.20G243500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47395076-47396075 Glycine max
Glyma.20G243500 2.0kb upstream 2.0kb upstream 5991 true Chr20: 47389085-47395075 Glycine max
Glyma.20G243500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47389085-47391084 Glycine max
Glyma.20G243500 2.0kb downstream 2.0kb downstream 5991 true Chr20: 47391085-47397075 Glycine max
Glyma.20G243500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47395076-47397075 Glycine max
Glyma.20G243500 5.0kb upstream 5.0kb upstream 8991 true Chr20: 47386085-47395075 Glycine max
Glyma.20G243500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47386085-47391084 Glycine max
Glyma.20G243500 5.0kb downstream 5.0kb downstream 8991 true Chr20: 47391085-47400075 Glycine max
Glyma.20G243500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47395076-47400075 Glycine max
Glyma.20G243500 10.0kb upstream 10.0kb upstream 13991 true Chr20: 47381085-47395075 Glycine max
Glyma.20G243500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47381085-47391084 Glycine max
Glyma.20G243500 10.0kb downstream 10.0kb downstream 13991 true Chr20: 47391085-47405075 Glycine max
Glyma.20G243500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47395076-47405075 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307076 5265 Fabidae View MSA
124064977 5270 Rosid View MSA
123741287 5271 Pentapetalae View MSA
122787703 5272 Eudicot View MSA
122048752 5273 Angiosperm View MSA
121350420 5274 Embryophyte View MSA
123423818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 80.6704 0.0 269.224 High High
cufflinks 56.9213 0.0 177.199 High High
cufflinks 7.33835 0.0 19.6878    
cufflinks 21.6342 0.0 59.404 High  
cufflinks 6.45824 0.0 17.4303    
cufflinks 6.07316 0.0 16.4443    
cufflinks 14.7979 0.0 39.7405    
cufflinks 12.0248 0.0 32.128    
cufflinks 0.756435 0.0 2.61378   Low
cufflinks 30.72     High  
cufflinks 0.005     Low Low
cufflinks 14.872     High  
cufflinks 0.095        
cufflinks 0.036     Low  
cufflinks 0.029     Low  
cufflinks 178.4     High High
cufflinks 0.007     Low Low
cufflinks 27.186     High  
cufflinks 44.435     High  
cufflinks 187.688     High High
cufflinks 0.011     Low Low
cufflinks 163.577     High High
cufflinks 137.959     High High
cufflinks 0.005     Low Low
cufflinks 183.288     High High
cufflinks 0.024     Low  

0 Strain