Gene : Glyma.20G234400 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  2344
Name:  ? Glyma.20G234400 Secondary Identifier:  ? PAC:30522458
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G234400 0.5kb upstream 0.5kb upstream 1369 true Chr20: 46694756-46696124 Glycine max
Glyma.20G234400 0.5kb upstream 0.5kb upstream 500 false Chr20: 46694756-46695255 Glycine max
Glyma.20G234400 0.5kb downstream 0.5kb downstream 1369 true Chr20: 46695256-46696624 Glycine max
Glyma.20G234400 0.5kb downstream 0.5kb downstream 500 false Chr20: 46696125-46696624 Glycine max
Glyma.20G234400 1.0kb upstream 1.0kb upstream 1869 true Chr20: 46694256-46696124 Glycine max
Glyma.20G234400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46694256-46695255 Glycine max
Glyma.20G234400 1.0kb downstream 1.0kb downstream 1869 true Chr20: 46695256-46697124 Glycine max
Glyma.20G234400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46696125-46697124 Glycine max
Glyma.20G234400 2.0kb upstream 2.0kb upstream 2869 true Chr20: 46693256-46696124 Glycine max
Glyma.20G234400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46693256-46695255 Glycine max
Glyma.20G234400 2.0kb downstream 2.0kb downstream 2869 true Chr20: 46695256-46698124 Glycine max
Glyma.20G234400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46696125-46698124 Glycine max
Glyma.20G234400 5.0kb upstream 5.0kb upstream 5869 true Chr20: 46690256-46696124 Glycine max
Glyma.20G234400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46690256-46695255 Glycine max
Glyma.20G234400 5.0kb downstream 5.0kb downstream 5869 true Chr20: 46695256-46701124 Glycine max
Glyma.20G234400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46696125-46701124 Glycine max
Glyma.20G234400 10.0kb upstream 10.0kb upstream 10869 true Chr20: 46685256-46696124 Glycine max
Glyma.20G234400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46685256-46695255 Glycine max
Glyma.20G234400 10.0kb downstream 10.0kb downstream 10869 true Chr20: 46695256-46706124 Glycine max
Glyma.20G234400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46696125-46706124 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298593 5265 Fabidae View MSA
124071264 5270 Rosid View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.15499 0.0 0.620474 Low  
cufflinks 0.199686 0.0 0.791868 Low  
cufflinks 0.0157379 0.0 0.0744597 Low Low
cufflinks 0.163661 0.0 0.653091 Low  
cufflinks 0.130635 0.0 0.526418 Low  
cufflinks 0.0479198 0.0 0.205362 Low  
cufflinks 0.342991 0.0 1.33395   High
cufflinks 0.397475 0.0 1.53283   High
cufflinks 0.101663 0.0 0.414068 Low  
cufflinks 0.296       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low Low
cufflinks 0.056     Low  
cufflinks 0.021     Low Low
cufflinks 0.122        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.167        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.173        
cufflinks 0.022     Low Low
cufflinks 0.022     Low Low
cufflinks 0.118        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain