Gene : Glyma.20G235300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12549:SF17 - WRC, ZF-4CXXC-R1 TRANSCRIPTION FACTOR AND JUMONJI DOMAIN-CONTAINING PROTEIN Genomic Order:  2353
Name:  ? Glyma.20G235300 Secondary Identifier:  ? PAC:30520608
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G235300 0.5kb upstream 0.5kb upstream 8205 true Chr20: 46790436-46798640 Glycine max
Glyma.20G235300 0.5kb upstream 0.5kb upstream 500 false Chr20: 46798141-46798640 Glycine max
Glyma.20G235300 0.5kb downstream 0.5kb downstream 8205 true Chr20: 46789936-46798140 Glycine max
Glyma.20G235300 0.5kb downstream 0.5kb downstream 500 false Chr20: 46789936-46790435 Glycine max
Glyma.20G235300 1.0kb upstream 1.0kb upstream 8705 true Chr20: 46790436-46799140 Glycine max
Glyma.20G235300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46798141-46799140 Glycine max
Glyma.20G235300 1.0kb downstream 1.0kb downstream 8705 true Chr20: 46789436-46798140 Glycine max
Glyma.20G235300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46789436-46790435 Glycine max
Glyma.20G235300 2.0kb upstream 2.0kb upstream 9705 true Chr20: 46790436-46800140 Glycine max
Glyma.20G235300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46798141-46800140 Glycine max
Glyma.20G235300 2.0kb downstream 2.0kb downstream 9705 true Chr20: 46788436-46798140 Glycine max
Glyma.20G235300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46788436-46790435 Glycine max
Glyma.20G235300 5.0kb upstream 5.0kb upstream 12705 true Chr20: 46790436-46803140 Glycine max
Glyma.20G235300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46798141-46803140 Glycine max
Glyma.20G235300 5.0kb downstream 5.0kb downstream 12705 true Chr20: 46785436-46798140 Glycine max
Glyma.20G235300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46785436-46790435 Glycine max
Glyma.20G235300 10.0kb upstream 10.0kb upstream 17705 true Chr20: 46790436-46808140 Glycine max
Glyma.20G235300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46798141-46808140 Glycine max
Glyma.20G235300 10.0kb downstream 10.0kb downstream 17705 true Chr20: 46780436-46798140 Glycine max
Glyma.20G235300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46780436-46790435 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300928 5265 Fabidae View MSA
124066315 5270 Rosid View MSA
123739621 5271 Pentapetalae View MSA
122793183 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.60371 0.0 17.7348   Low
cufflinks 9.73817 0.0 25.9806    
cufflinks 9.74696 0.0 26.005    
cufflinks 12.7603 0.0 34.1976   High
cufflinks 6.34477 0.0 17.063   Low
cufflinks 7.09341 0.0 19.0026    
cufflinks 9.52344 0.0 25.4073    
cufflinks 9.49778 0.0 25.3391    
cufflinks 6.73147 0.0 18.0703    
cufflinks 3.607        
cufflinks 2.414       Low
cufflinks 5.087        
cufflinks 3.271        
cufflinks 3.073        
cufflinks 2.11       Low
cufflinks 5.494        
cufflinks 1.81       Low
cufflinks 5.182        
cufflinks 5.417        
cufflinks 6.312       High
cufflinks 3.273        
cufflinks 5.517        
cufflinks 4.262        
cufflinks 2.911        
cufflinks 5.797       High
cufflinks 2.403       Low

0 Strain