Gene : Glyma.20G237800 G. max Wm82.a2.v1
Defline:  (1 of 164) 3.1.1.11 - Pectinesterase / Pectin methylesterase Genomic Order:  2378
Name:  ? Glyma.20G237800 Secondary Identifier:  ? PAC:30521098
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G237800 0.5kb upstream 0.5kb upstream 3137 true Chr20: 46950750-46953886 Glycine max
Glyma.20G237800 0.5kb upstream 0.5kb upstream 500 false Chr20: 46953387-46953886 Glycine max
Glyma.20G237800 0.5kb downstream 0.5kb downstream 3137 true Chr20: 46950250-46953386 Glycine max
Glyma.20G237800 0.5kb downstream 0.5kb downstream 500 false Chr20: 46950250-46950749 Glycine max
Glyma.20G237800 1.0kb upstream 1.0kb upstream 3637 true Chr20: 46950750-46954386 Glycine max
Glyma.20G237800 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46953387-46954386 Glycine max
Glyma.20G237800 1.0kb downstream 1.0kb downstream 3637 true Chr20: 46949750-46953386 Glycine max
Glyma.20G237800 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46949750-46950749 Glycine max
Glyma.20G237800 2.0kb upstream 2.0kb upstream 4637 true Chr20: 46950750-46955386 Glycine max
Glyma.20G237800 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46953387-46955386 Glycine max
Glyma.20G237800 2.0kb downstream 2.0kb downstream 4637 true Chr20: 46948750-46953386 Glycine max
Glyma.20G237800 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46948750-46950749 Glycine max
Glyma.20G237800 5.0kb upstream 5.0kb upstream 7637 true Chr20: 46950750-46958386 Glycine max
Glyma.20G237800 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46953387-46958386 Glycine max
Glyma.20G237800 5.0kb downstream 5.0kb downstream 7637 true Chr20: 46945750-46953386 Glycine max
Glyma.20G237800 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46945750-46950749 Glycine max
Glyma.20G237800 10.0kb upstream 10.0kb upstream 12637 true Chr20: 46950750-46963386 Glycine max
Glyma.20G237800 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46953387-46963386 Glycine max
Glyma.20G237800 10.0kb downstream 10.0kb downstream 12637 true Chr20: 46940750-46953386 Glycine max
Glyma.20G237800 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46940750-46950749 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314375 5265 Fabidae View MSA
124071187 5270 Rosid View MSA
123743579 5271 Pentapetalae View MSA
122788004 5272 Eudicot View MSA
122050714 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.0568 0.0 47.9547   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00844658 0.0 0.0457419 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0487247 0.0 0.19729 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.676       High
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.241       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain