Gene : Glyma.20G231400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR28554:SF1 - 39S RIBOSOMAL PROTEIN L45, MITOCHONDRIAL Genomic Order:  2314
Name:  ? Glyma.20G231400 Secondary Identifier:  ? PAC:30521267
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G231400 0.5kb upstream 0.5kb upstream 7061 true Chr20: 46499990-46507050 Glycine max
Glyma.20G231400 0.5kb upstream 0.5kb upstream 500 false Chr20: 46506551-46507050 Glycine max
Glyma.20G231400 0.5kb downstream 0.5kb downstream 7061 true Chr20: 46499490-46506550 Glycine max
Glyma.20G231400 0.5kb downstream 0.5kb downstream 500 false Chr20: 46499490-46499989 Glycine max
Glyma.20G231400 1.0kb upstream 1.0kb upstream 7561 true Chr20: 46499990-46507550 Glycine max
Glyma.20G231400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46506551-46507550 Glycine max
Glyma.20G231400 1.0kb downstream 1.0kb downstream 7561 true Chr20: 46498990-46506550 Glycine max
Glyma.20G231400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46498990-46499989 Glycine max
Glyma.20G231400 2.0kb upstream 2.0kb upstream 8561 true Chr20: 46499990-46508550 Glycine max
Glyma.20G231400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46506551-46508550 Glycine max
Glyma.20G231400 2.0kb downstream 2.0kb downstream 8561 true Chr20: 46497990-46506550 Glycine max
Glyma.20G231400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46497990-46499989 Glycine max
Glyma.20G231400 5.0kb upstream 5.0kb upstream 11561 true Chr20: 46499990-46511550 Glycine max
Glyma.20G231400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46506551-46511550 Glycine max
Glyma.20G231400 5.0kb downstream 5.0kb downstream 11561 true Chr20: 46494990-46506550 Glycine max
Glyma.20G231400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46494990-46499989 Glycine max
Glyma.20G231400 10.0kb upstream 10.0kb upstream 16561 true Chr20: 46499990-46516550 Glycine max
Glyma.20G231400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46506551-46516550 Glycine max
Glyma.20G231400 10.0kb downstream 10.0kb downstream 16561 true Chr20: 46489990-46506550 Glycine max
Glyma.20G231400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46489990-46499989 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314731 5265 Fabidae View MSA
124050340 5270 Rosid View MSA
123738345 5271 Pentapetalae View MSA
122792875 5272 Eudicot View MSA
122048004 5273 Angiosperm View MSA
121346063 5274 Embryophyte View MSA
123424362 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2977 0.0 28.8035    
cufflinks 6.76041 0.0 19.7871    
cufflinks 2.69813 0.0 8.93744   Low
cufflinks 7.01794 0.0 20.4104    
cufflinks 12.6003 0.0 34.6286   High
cufflinks 6.77363 0.0 19.8692    
cufflinks 11.459 0.0 31.7515    
cufflinks 6.58743 0.0 19.3488    
cufflinks 12.2081 0.0 33.5743    
cufflinks 0.82        
cufflinks 0.227       Low
cufflinks 1.292        
cufflinks 2.758       High
cufflinks 4.139       High
cufflinks 0.773        
cufflinks 0.487        
cufflinks 0.647        
cufflinks 1.383        
cufflinks 1.453        
cufflinks 0.247       Low
cufflinks 0.34        
cufflinks 0.341        
cufflinks 0.6        
cufflinks 0.234       Low
cufflinks 0.377        
cufflinks 0.528        

0 Strain