Gene : Glyma.20G228700 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12341 - 5'->3' EXORIBONUCLEASE Genomic Order:  2287
Name:  ? Glyma.20G228700 Secondary Identifier:  ? PAC:30521546
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G228700 0.5kb upstream 0.5kb upstream 10718 true Chr20: 46289138-46299855 Glycine max
Glyma.20G228700 0.5kb upstream 0.5kb upstream 500 false Chr20: 46299356-46299855 Glycine max
Glyma.20G228700 0.5kb downstream 0.5kb downstream 10718 true Chr20: 46288638-46299355 Glycine max
Glyma.20G228700 0.5kb downstream 0.5kb downstream 500 false Chr20: 46288638-46289137 Glycine max
Glyma.20G228700 1.0kb upstream 1.0kb upstream 11218 true Chr20: 46289138-46300355 Glycine max
Glyma.20G228700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 46299356-46300355 Glycine max
Glyma.20G228700 1.0kb downstream 1.0kb downstream 11218 true Chr20: 46288138-46299355 Glycine max
Glyma.20G228700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 46288138-46289137 Glycine max
Glyma.20G228700 2.0kb upstream 2.0kb upstream 12218 true Chr20: 46289138-46301355 Glycine max
Glyma.20G228700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 46299356-46301355 Glycine max
Glyma.20G228700 2.0kb downstream 2.0kb downstream 12218 true Chr20: 46287138-46299355 Glycine max
Glyma.20G228700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 46287138-46289137 Glycine max
Glyma.20G228700 5.0kb upstream 5.0kb upstream 15218 true Chr20: 46289138-46304355 Glycine max
Glyma.20G228700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 46299356-46304355 Glycine max
Glyma.20G228700 5.0kb downstream 5.0kb downstream 15218 true Chr20: 46284138-46299355 Glycine max
Glyma.20G228700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 46284138-46289137 Glycine max
Glyma.20G228700 10.0kb upstream 10.0kb upstream 20218 true Chr20: 46289138-46309355 Glycine max
Glyma.20G228700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 46299356-46309355 Glycine max
Glyma.20G228700 10.0kb downstream 10.0kb downstream 20218 true Chr20: 46279138-46299355 Glycine max
Glyma.20G228700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 46279138-46289137 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254630 5265 Fabidae View MSA
124065643 5270 Rosid View MSA
123737984 5271 Pentapetalae View MSA
122795670 5272 Eudicot View MSA
122042624 5273 Angiosperm View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.50296 0.0 14.7676    
cufflinks 2.84786 0.0 14.1247    
cufflinks 5.3132 0.0 19.0197   High
cufflinks 2.50561 0.0 9.05494   Low
cufflinks 3.61223 0.0 12.0512    
cufflinks 5.46969 0.0 16.958   High
cufflinks 2.46155 0.0 9.93248   Low
cufflinks 3.13579 0.0 11.9545    
cufflinks 4.06931 0.0 12.6969    
cufflinks 0.271       Low
cufflinks 0.467        
cufflinks 0.403        
cufflinks 0.495        
cufflinks 0.417        
cufflinks 0.438        
cufflinks 0.389        
cufflinks 0.335       Low
cufflinks 0.338       Low
cufflinks 0.486        
cufflinks 0.38        
cufflinks 0.508       High
cufflinks 0.416        
cufflinks 0.368        
cufflinks 0.564       High
cufflinks 0.365        
cufflinks 0.511       High

0 Strain