Gene : Glyma.U011400 G. max Wm82.a2.v1
Defline:  (1 of 30) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  23
Name:  ? Glyma.U011400 Secondary Identifier:  ? PAC:30535321
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U011400 0.5kb upstream 0.5kb upstream 2875 true scaffold_21: 410635-413509 Glycine max
Glyma.U011400 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 413010-413509 Glycine max
Glyma.U011400 0.5kb downstream 0.5kb downstream 2875 true scaffold_21: 410135-413009 Glycine max
Glyma.U011400 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 410135-410634 Glycine max
Glyma.U011400 1.0kb upstream 1.0kb upstream 3375 true scaffold_21: 410635-414009 Glycine max
Glyma.U011400 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 413010-414009 Glycine max
Glyma.U011400 1.0kb downstream 1.0kb downstream 3375 true scaffold_21: 409635-413009 Glycine max
Glyma.U011400 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 409635-410634 Glycine max
Glyma.U011400 2.0kb upstream 2.0kb upstream 4375 true scaffold_21: 410635-415009 Glycine max
Glyma.U011400 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 413010-415009 Glycine max
Glyma.U011400 2.0kb downstream 2.0kb downstream 4375 true scaffold_21: 408635-413009 Glycine max
Glyma.U011400 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 408635-410634 Glycine max
Glyma.U011400 5.0kb upstream 5.0kb upstream 7375 true scaffold_21: 410635-418009 Glycine max
Glyma.U011400 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 413010-418009 Glycine max
Glyma.U011400 5.0kb downstream 5.0kb downstream 7375 true scaffold_21: 405635-413009 Glycine max
Glyma.U011400 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 405635-410634 Glycine max
Glyma.U011400 10.0kb upstream 10.0kb upstream 12375 true scaffold_21: 410635-423009 Glycine max
Glyma.U011400 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 413010-423009 Glycine max
Glyma.U011400 10.0kb downstream 10.0kb downstream 12375 true scaffold_21: 400635-413009 Glycine max
Glyma.U011400 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 400635-410634 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041222 5273 Angiosperm View MSA
122299842 5265 Fabidae View MSA
124061331 5270 Rosid View MSA
123737344 5271 Pentapetalae View MSA
122792572 5272 Eudicot View MSA
121350312 5274 Embryophyte View MSA
123381673 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2516 0.0 33.9933    
cufflinks 17.8165 0.0 48.1487    
cufflinks 20.4786 0.0 54.9594 High  
cufflinks 11.6438 0.0 32.4118    
cufflinks 25.2315 0.0 67.4016 High  
cufflinks 22.5115 0.0 60.2618    
cufflinks 15.1535 0.0 41.332    
cufflinks 10.0502 0.0 28.3748   Low
cufflinks 60.258 0.0 165.286 High High
cufflinks 4.522        
cufflinks 12.349     High  
cufflinks 10.359     High  
cufflinks 2.678       Low
cufflinks 1.922       Low
cufflinks 24.162     High High
cufflinks 7.317     High  
cufflinks 8.081     High  
cufflinks 10.077     High  
cufflinks 7.105        
cufflinks 6.756        
cufflinks 8.669     High  
cufflinks 7.351     High  
cufflinks 4.95        
cufflinks 11.103     High  
cufflinks 5.674        
cufflinks 7.479     High  

0 Strain