Gene : Glyma.U027500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10641:SF524 - ATMYB1 PROTEIN Genomic Order:  3
Name:  ? Glyma.U027500 Secondary Identifier:  ? PAC:30487104
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U027500 0.5kb upstream 0.5kb upstream 11754 true scaffold_27: 230461-242214 Glycine max
Glyma.U027500 0.5kb upstream 0.5kb upstream 500 false scaffold_27: 230461-230960 Glycine max
Glyma.U027500 0.5kb downstream 0.5kb downstream 11754 true scaffold_27: 230961-242714 Glycine max
Glyma.U027500 0.5kb downstream 0.5kb downstream 500 false scaffold_27: 242215-242714 Glycine max
Glyma.U027500 1.0kb upstream 1.0kb upstream 12254 true scaffold_27: 229961-242214 Glycine max
Glyma.U027500 1.0kb upstream 1.0kb upstream 1000 false scaffold_27: 229961-230960 Glycine max
Glyma.U027500 1.0kb downstream 1.0kb downstream 12254 true scaffold_27: 230961-243214 Glycine max
Glyma.U027500 1.0kb downstream 1.0kb downstream 1000 false scaffold_27: 242215-243214 Glycine max
Glyma.U027500 2.0kb upstream 2.0kb upstream 13254 true scaffold_27: 228961-242214 Glycine max
Glyma.U027500 2.0kb upstream 2.0kb upstream 2000 false scaffold_27: 228961-230960 Glycine max
Glyma.U027500 2.0kb downstream 2.0kb downstream 13254 true scaffold_27: 230961-244214 Glycine max
Glyma.U027500 2.0kb downstream 2.0kb downstream 2000 false scaffold_27: 242215-244214 Glycine max
Glyma.U027500 5.0kb upstream 5.0kb upstream 16254 true scaffold_27: 225961-242214 Glycine max
Glyma.U027500 5.0kb upstream 5.0kb upstream 5000 false scaffold_27: 225961-230960 Glycine max
Glyma.U027500 5.0kb downstream 5.0kb downstream 16254 true scaffold_27: 230961-247214 Glycine max
Glyma.U027500 5.0kb downstream 5.0kb downstream 5000 false scaffold_27: 242215-247214 Glycine max
Glyma.U027500 10.0kb upstream 10.0kb upstream 21254 true scaffold_27: 220961-242214 Glycine max
Glyma.U027500 10.0kb upstream 10.0kb upstream 10000 false scaffold_27: 220961-230960 Glycine max
Glyma.U027500 10.0kb downstream 10.0kb downstream 21254 true scaffold_27: 230961-252214 Glycine max
Glyma.U027500 10.0kb downstream 10.0kb downstream 10000 false scaffold_27: 242215-252214 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300795 5265 Fabidae View MSA
124065545 5270 Rosid View MSA
123745046 5271 Pentapetalae View MSA
122792993 5272 Eudicot View MSA
122045761 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121346052 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9599 0.0 6.51381   Low
cufflinks 2.69224 0.0 8.59271    
cufflinks 2.1545 0.0 7.08787    
cufflinks 1.98831 0.0 6.6011    
cufflinks 2.0535 0.0 6.75653    
cufflinks 3.80357 0.0 11.505   High
cufflinks 3.01895 0.0 9.44188    
cufflinks 2.44915 0.0 7.90507    
cufflinks 2.76829 0.0 8.77027    
cufflinks 0.314        
cufflinks 0.204       Low
cufflinks 0.328        
cufflinks 0.387        
cufflinks 0.353        
cufflinks 0.212       Low
cufflinks 0.28        
cufflinks 0.21       Low
cufflinks 0.477       High
cufflinks 0.502       High
cufflinks 0.337        
cufflinks 0.311        
cufflinks 0.278        
cufflinks 0.338        
cufflinks 0.375        
cufflinks 0.308        
cufflinks 0.221       Low

0 Strain