Gene : Glyma.U030400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11119:SF52 - NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED Genomic Order:  19
Name:  ? Glyma.U030400 Secondary Identifier:  ? PAC:30523576
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U030400 0.5kb upstream 0.5kb upstream 5279 true scaffold_28: 263018-268296 Glycine max
Glyma.U030400 0.5kb upstream 0.5kb upstream 500 false scaffold_28: 267797-268296 Glycine max
Glyma.U030400 0.5kb downstream 0.5kb downstream 5279 true scaffold_28: 262518-267796 Glycine max
Glyma.U030400 0.5kb downstream 0.5kb downstream 500 false scaffold_28: 262518-263017 Glycine max
Glyma.U030400 1.0kb upstream 1.0kb upstream 5779 true scaffold_28: 263018-268796 Glycine max
Glyma.U030400 1.0kb upstream 1.0kb upstream 1000 false scaffold_28: 267797-268796 Glycine max
Glyma.U030400 1.0kb downstream 1.0kb downstream 5779 true scaffold_28: 262018-267796 Glycine max
Glyma.U030400 1.0kb downstream 1.0kb downstream 1000 false scaffold_28: 262018-263017 Glycine max
Glyma.U030400 2.0kb upstream 2.0kb upstream 6779 true scaffold_28: 263018-269796 Glycine max
Glyma.U030400 2.0kb upstream 2.0kb upstream 2000 false scaffold_28: 267797-269796 Glycine max
Glyma.U030400 2.0kb downstream 2.0kb downstream 6779 true scaffold_28: 261018-267796 Glycine max
Glyma.U030400 2.0kb downstream 2.0kb downstream 2000 false scaffold_28: 261018-263017 Glycine max
Glyma.U030400 5.0kb upstream 5.0kb upstream 9779 true scaffold_28: 263018-272796 Glycine max
Glyma.U030400 5.0kb upstream 5.0kb upstream 5000 false scaffold_28: 267797-272796 Glycine max
Glyma.U030400 5.0kb downstream 5.0kb downstream 9779 true scaffold_28: 258018-267796 Glycine max
Glyma.U030400 5.0kb downstream 5.0kb downstream 5000 false scaffold_28: 258018-263017 Glycine max
Glyma.U030400 10.0kb upstream 10.0kb upstream 14779 true scaffold_28: 263018-277796 Glycine max
Glyma.U030400 10.0kb upstream 10.0kb upstream 10000 false scaffold_28: 267797-277796 Glycine max
Glyma.U030400 10.0kb downstream 10.0kb downstream 14779 true scaffold_28: 253018-267796 Glycine max
Glyma.U030400 10.0kb downstream 10.0kb downstream 10000 false scaffold_28: 253018-263017 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779215 5273 Angiosperm View MSA
122300601 5265 Fabidae View MSA
124071699 5270 Rosid View MSA
123740859 5271 Pentapetalae View MSA
122769992 5272 Eudicot View MSA
121050893 5274 Embryophyte View MSA
123091005 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0612913 0.0 0.25033 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0291524 0.0 0.125557 Low  
cufflinks 0.0330936 0.0 0.141118 Low  
cufflinks 0.0330211 0.0 0.140731 Low  
cufflinks 0.009     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.007     Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low High
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain