Gene : Glyma.U021900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31356:SF10 - L-ASCORBATE PEROXIDASE 2, CYTOSOLIC Genomic Order:  128
Name:  ? Glyma.U021900 Secondary Identifier:  ? PAC:30535257
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2261 Glycine max pathologic  
Gmax PWY-6959 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U021900 0.5kb upstream 0.5kb upstream 3222 true scaffold_21: 3519949-3523170 Glycine max
Glyma.U021900 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3522671-3523170 Glycine max
Glyma.U021900 0.5kb downstream 0.5kb downstream 3222 true scaffold_21: 3519449-3522670 Glycine max
Glyma.U021900 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3519449-3519948 Glycine max
Glyma.U021900 1.0kb upstream 1.0kb upstream 3722 true scaffold_21: 3519949-3523670 Glycine max
Glyma.U021900 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3522671-3523670 Glycine max
Glyma.U021900 1.0kb downstream 1.0kb downstream 3722 true scaffold_21: 3518949-3522670 Glycine max
Glyma.U021900 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3518949-3519948 Glycine max
Glyma.U021900 2.0kb upstream 2.0kb upstream 4722 true scaffold_21: 3519949-3524670 Glycine max
Glyma.U021900 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3522671-3524670 Glycine max
Glyma.U021900 2.0kb downstream 2.0kb downstream 4722 true scaffold_21: 3517949-3522670 Glycine max
Glyma.U021900 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3517949-3519948 Glycine max
Glyma.U021900 5.0kb upstream 5.0kb upstream 7722 true scaffold_21: 3519949-3527670 Glycine max
Glyma.U021900 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3522671-3527670 Glycine max
Glyma.U021900 5.0kb downstream 5.0kb downstream 7722 true scaffold_21: 3514949-3522670 Glycine max
Glyma.U021900 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3514949-3519948 Glycine max
Glyma.U021900 10.0kb upstream 10.0kb upstream 12722 true scaffold_21: 3519949-3532670 Glycine max
Glyma.U021900 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3522671-3532670 Glycine max
Glyma.U021900 10.0kb downstream 10.0kb downstream 12722 true scaffold_21: 3509949-3522670 Glycine max
Glyma.U021900 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3509949-3519948 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306209 5265 Fabidae View MSA
124068994 5270 Rosid View MSA
123741454 5271 Pentapetalae View MSA
122796920 5272 Eudicot View MSA
122044564 5273 Angiosperm View MSA
121344996 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 188.822 0.0 1125.35 High Low
cufflinks 419.262 0.0 4274.71 High  
cufflinks 226.053 0.0 1565.18 High  
cufflinks 347.693 0.0 2476.82 High  
cufflinks 566.183 0.0 7629.12 High  
cufflinks 991.233 0.0 21757.5 High High
cufflinks 138.537 0.0 608.778 High Low
cufflinks 410.941 0.0 4207.85 High  
cufflinks 675.247 0.0 10402.7 High  
cufflinks 49.53     High  
cufflinks 22.09     High Low
cufflinks 51.79     High  
cufflinks 106.997     High High
cufflinks 100.991     High High
cufflinks 35.43     High  
cufflinks 35.919     High  
cufflinks 48.789     High  
cufflinks 48.321     High  
cufflinks 79.149     High High
cufflinks 17.659     High Low
cufflinks 27.762     High  
cufflinks 29.504     High  
cufflinks 54.804     High  
cufflinks 28.89     High  
cufflinks 27.053     High  
cufflinks 40.683     High  

0 Strain