Gene : Glyma.U022100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32467:SF29 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 Genomic Order:  130
Name:  ? Glyma.U022100 Secondary Identifier:  ? PAC:30535392
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U022100 0.5kb upstream 0.5kb upstream 4858 true scaffold_21: 3550792-3555649 Glycine max
Glyma.U022100 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3555150-3555649 Glycine max
Glyma.U022100 0.5kb downstream 0.5kb downstream 4858 true scaffold_21: 3550292-3555149 Glycine max
Glyma.U022100 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3550292-3550791 Glycine max
Glyma.U022100 1.0kb upstream 1.0kb upstream 5358 true scaffold_21: 3550792-3556149 Glycine max
Glyma.U022100 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3555150-3556149 Glycine max
Glyma.U022100 1.0kb downstream 1.0kb downstream 5358 true scaffold_21: 3549792-3555149 Glycine max
Glyma.U022100 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3549792-3550791 Glycine max
Glyma.U022100 2.0kb upstream 2.0kb upstream 6358 true scaffold_21: 3550792-3557149 Glycine max
Glyma.U022100 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3555150-3557149 Glycine max
Glyma.U022100 2.0kb downstream 2.0kb downstream 6358 true scaffold_21: 3548792-3555149 Glycine max
Glyma.U022100 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3548792-3550791 Glycine max
Glyma.U022100 5.0kb upstream 5.0kb upstream 9358 true scaffold_21: 3550792-3560149 Glycine max
Glyma.U022100 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3555150-3560149 Glycine max
Glyma.U022100 5.0kb downstream 5.0kb downstream 9358 true scaffold_21: 3545792-3555149 Glycine max
Glyma.U022100 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3545792-3550791 Glycine max
Glyma.U022100 10.0kb upstream 10.0kb upstream 14335 true scaffold_21: 3550792-3565126 Glycine max
Glyma.U022100 10.0kb upstream 10.0kb upstream 9977 false scaffold_21: 3555150-3565126 Glycine max
Glyma.U022100 10.0kb downstream 10.0kb downstream 14358 true scaffold_21: 3540792-3555149 Glycine max
Glyma.U022100 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3540792-3550791 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240582 5265 Fabidae Singleton cluster - no MSA
123985612 5270 Rosid Singleton cluster - no MSA
123742142 5271 Pentapetalae View MSA
122795451 5272 Eudicot View MSA
122048661 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121311060 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.6006 0.0 129.005    
cufflinks 13.6174 0.0 77.6692    
cufflinks 1.13814 0.0 10.6401    
cufflinks 0.508221 0.0 5.15912   Low
cufflinks 12.05 0.0 55.5714    
cufflinks 22.4006 0.0 121.86    
cufflinks 0.185319 0.0 1.24278 Low Low
cufflinks 10.2744 0.0 55.281    
cufflinks 9.91361 0.0 51.5507    
cufflinks 0.622        
cufflinks 0.424        
cufflinks 0.108     Low Low
cufflinks 0.748        
cufflinks 0.229        
cufflinks 0.171       Low
cufflinks 2.322       High
cufflinks 0.667        
cufflinks 0.107     Low Low
cufflinks 1.522        
cufflinks 1.838        
cufflinks 0.661        
cufflinks 2.696       High
cufflinks 4.053       High
cufflinks 0.6        
cufflinks 1.921        
cufflinks 0.518        

0 Strain