Gene : Glyma.U020400 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG4760 - Uncharacterized conserved protein Genomic Order:  113
Name:  ? Glyma.U020400 Secondary Identifier:  ? PAC:30535367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U020400 0.5kb upstream 0.5kb upstream 4035 true scaffold_21: 3344488-3348522 Glycine max
Glyma.U020400 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3344488-3344987 Glycine max
Glyma.U020400 0.5kb downstream 0.5kb downstream 4035 true scaffold_21: 3344988-3349022 Glycine max
Glyma.U020400 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3348523-3349022 Glycine max
Glyma.U020400 1.0kb upstream 1.0kb upstream 4535 true scaffold_21: 3343988-3348522 Glycine max
Glyma.U020400 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3343988-3344987 Glycine max
Glyma.U020400 1.0kb downstream 1.0kb downstream 4535 true scaffold_21: 3344988-3349522 Glycine max
Glyma.U020400 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3348523-3349522 Glycine max
Glyma.U020400 2.0kb upstream 2.0kb upstream 5535 true scaffold_21: 3342988-3348522 Glycine max
Glyma.U020400 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3342988-3344987 Glycine max
Glyma.U020400 2.0kb downstream 2.0kb downstream 5535 true scaffold_21: 3344988-3350522 Glycine max
Glyma.U020400 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3348523-3350522 Glycine max
Glyma.U020400 5.0kb upstream 5.0kb upstream 8535 true scaffold_21: 3339988-3348522 Glycine max
Glyma.U020400 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3339988-3344987 Glycine max
Glyma.U020400 5.0kb downstream 5.0kb downstream 8535 true scaffold_21: 3344988-3353522 Glycine max
Glyma.U020400 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3348523-3353522 Glycine max
Glyma.U020400 10.0kb upstream 10.0kb upstream 13535 true scaffold_21: 3334988-3348522 Glycine max
Glyma.U020400 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3334988-3344987 Glycine max
Glyma.U020400 10.0kb downstream 10.0kb downstream 13535 true scaffold_21: 3344988-3358522 Glycine max
Glyma.U020400 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3348523-3358522 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040903 5273 Angiosperm View MSA
122304507 5265 Fabidae View MSA
124064203 5270 Rosid View MSA
123749441 5271 Pentapetalae View MSA
122786529 5272 Eudicot View MSA
121344438 5274 Embryophyte View MSA
123426878 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.27009 0.0 19.1025    
cufflinks 3.70559 0.0 15.8424    
cufflinks 8.43974 0.0 27.132    
cufflinks 3.58321 0.0 11.1262   Low
cufflinks 6.34717 0.0 26.7303    
cufflinks 9.19939 0.0 35.2134    
cufflinks 4.87121 0.0 18.0129    
cufflinks 3.8006 0.0 16.0831    
cufflinks 15.6252 0.0 56.2983   High
cufflinks 1.267       Low
cufflinks 2.127        
cufflinks 2.438        
cufflinks 1.757        
cufflinks 1.873        
cufflinks 6.978     High High
cufflinks 1.545        
cufflinks 2.139        
cufflinks 2.186        
cufflinks 1.456        
cufflinks 1.819        
cufflinks 1.574        
cufflinks 1.752        
cufflinks 1.843        
cufflinks 2.367        
cufflinks 1.653        
cufflinks 1.854        

0 Strain