Gene : Glyma.U038900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10641:SF519 - TRANSCRIPTION FACTOR RAX2 Genomic Order:  13
Name:  ? Glyma.U038900 Secondary Identifier:  ? PAC:30541484
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U038900 0.5kb upstream 0.5kb upstream 2743 true scaffold_44: 111908-114650 Glycine max
Glyma.U038900 0.5kb upstream 0.5kb upstream 500 false scaffold_44: 114151-114650 Glycine max
Glyma.U038900 0.5kb downstream 0.5kb downstream 2743 true scaffold_44: 111408-114150 Glycine max
Glyma.U038900 0.5kb downstream 0.5kb downstream 500 false scaffold_44: 111408-111907 Glycine max
Glyma.U038900 1.0kb upstream 1.0kb upstream 3243 true scaffold_44: 111908-115150 Glycine max
Glyma.U038900 1.0kb upstream 1.0kb upstream 1000 false scaffold_44: 114151-115150 Glycine max
Glyma.U038900 1.0kb downstream 1.0kb downstream 3243 true scaffold_44: 110908-114150 Glycine max
Glyma.U038900 1.0kb downstream 1.0kb downstream 1000 false scaffold_44: 110908-111907 Glycine max
Glyma.U038900 2.0kb upstream 2.0kb upstream 4243 true scaffold_44: 111908-116150 Glycine max
Glyma.U038900 2.0kb upstream 2.0kb upstream 2000 false scaffold_44: 114151-116150 Glycine max
Glyma.U038900 2.0kb downstream 2.0kb downstream 4243 true scaffold_44: 109908-114150 Glycine max
Glyma.U038900 2.0kb downstream 2.0kb downstream 2000 false scaffold_44: 109908-111907 Glycine max
Glyma.U038900 5.0kb upstream 5.0kb upstream 7243 true scaffold_44: 111908-119150 Glycine max
Glyma.U038900 5.0kb upstream 5.0kb upstream 5000 false scaffold_44: 114151-119150 Glycine max
Glyma.U038900 5.0kb downstream 5.0kb downstream 7243 true scaffold_44: 106908-114150 Glycine max
Glyma.U038900 5.0kb downstream 5.0kb downstream 5000 false scaffold_44: 106908-111907 Glycine max
Glyma.U038900 10.0kb upstream 10.0kb upstream 12243 true scaffold_44: 111908-124150 Glycine max
Glyma.U038900 10.0kb upstream 10.0kb upstream 10000 false scaffold_44: 114151-124150 Glycine max
Glyma.U038900 10.0kb downstream 10.0kb downstream 12243 true scaffold_44: 101908-114150 Glycine max
Glyma.U038900 10.0kb downstream 10.0kb downstream 10000 false scaffold_44: 101908-111907 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311579 5265 Fabidae View MSA
124071714 5270 Rosid View MSA
123746695 5271 Pentapetalae View MSA
122790538 5272 Eudicot View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.269375 0.0 1.84936    
cufflinks 1.16666 0.0 5.11572    
cufflinks 1.72538 0.0 6.77134    
cufflinks 0.397486 0.0 1.98204    
cufflinks 2.15795 0.0 8.09361    
cufflinks 1.33535 0.0 7.49193    
cufflinks 0.0260613 0.0 0.118663 Low Low
cufflinks 0.4666 0.0 2.28066    
cufflinks 1.4942 0.0 6.07189    
cufflinks 0.057     Low Low
cufflinks 4.284       High
cufflinks 0.495        
cufflinks 0.817        
cufflinks 0.959        
cufflinks 1.388        
cufflinks 0.422        
cufflinks 0.268        
cufflinks 0.15       Low
cufflinks 0.566        
cufflinks 0.285        
cufflinks 3.75       High
cufflinks 0.296        
cufflinks 0.326        
cufflinks 3.862       High
cufflinks 0.245        
cufflinks 2.526       High

0 Strain