Gene : Sevir.5G415100 S. viridis v2.1
Defline:  (1 of 3) PTHR22600//PTHR22600:SF18 - BETA-HEXOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  4479
Name:  ? Sevir.5G415100 Secondary Identifier:  ? PAC:40634450
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6902 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G415100 0.5kb upstream 0.5kb upstream 6013 true Chr_05: 42912546-42918558 Setaria viridis
Sevir.5G415100 0.5kb upstream 0.5kb upstream 500 false Chr_05: 42918059-42918558 Setaria viridis
Sevir.5G415100 0.5kb downstream 0.5kb downstream 6013 true Chr_05: 42912046-42918058 Setaria viridis
Sevir.5G415100 0.5kb downstream 0.5kb downstream 500 false Chr_05: 42912046-42912545 Setaria viridis
Sevir.5G415100 1.0kb upstream 1.0kb upstream 6513 true Chr_05: 42912546-42919058 Setaria viridis
Sevir.5G415100 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 42918059-42919058 Setaria viridis
Sevir.5G415100 1.0kb downstream 1.0kb downstream 6513 true Chr_05: 42911546-42918058 Setaria viridis
Sevir.5G415100 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 42911546-42912545 Setaria viridis
Sevir.5G415100 2.0kb upstream 2.0kb upstream 7513 true Chr_05: 42912546-42920058 Setaria viridis
Sevir.5G415100 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 42918059-42920058 Setaria viridis
Sevir.5G415100 2.0kb downstream 2.0kb downstream 7513 true Chr_05: 42910546-42918058 Setaria viridis
Sevir.5G415100 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 42910546-42912545 Setaria viridis
Sevir.5G415100 5.0kb upstream 5.0kb upstream 10513 true Chr_05: 42912546-42923058 Setaria viridis
Sevir.5G415100 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 42918059-42923058 Setaria viridis
Sevir.5G415100 5.0kb downstream 5.0kb downstream 10513 true Chr_05: 42907546-42918058 Setaria viridis
Sevir.5G415100 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 42907546-42912545 Setaria viridis
Sevir.5G415100 10.0kb upstream 10.0kb upstream 15513 true Chr_05: 42912546-42928058 Setaria viridis
Sevir.5G415100 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 42918059-42928058 Setaria viridis
Sevir.5G415100 10.0kb downstream 10.0kb downstream 15513 true Chr_05: 42902546-42918058 Setaria viridis
Sevir.5G415100 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 42902546-42912545 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179982 5267 Panicoideae View MSA
124571085 5269 Grass View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain