Gene : Sevir.5G463400 S. viridis v2.1
Defline:  (1 of 1) PTHR31956//PTHR31956:SF10 - FAMILY NOT NAMED // NON-SPECIFIC PHOSPHOLIPASE C2 Genomic Order:  5010
Name:  ? Sevir.5G463400 Secondary Identifier:  ? PAC:40629583
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis LIPASYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G463400 0.5kb upstream 0.5kb upstream 5451 true Chr_05: 45965120-45970570 Setaria viridis
Sevir.5G463400 0.5kb upstream 0.5kb upstream 500 false Chr_05: 45970071-45970570 Setaria viridis
Sevir.5G463400 0.5kb downstream 0.5kb downstream 5451 true Chr_05: 45964620-45970070 Setaria viridis
Sevir.5G463400 0.5kb downstream 0.5kb downstream 500 false Chr_05: 45964620-45965119 Setaria viridis
Sevir.5G463400 1.0kb upstream 1.0kb upstream 5951 true Chr_05: 45965120-45971070 Setaria viridis
Sevir.5G463400 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 45970071-45971070 Setaria viridis
Sevir.5G463400 1.0kb downstream 1.0kb downstream 5951 true Chr_05: 45964120-45970070 Setaria viridis
Sevir.5G463400 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 45964120-45965119 Setaria viridis
Sevir.5G463400 2.0kb upstream 2.0kb upstream 6951 true Chr_05: 45965120-45972070 Setaria viridis
Sevir.5G463400 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 45970071-45972070 Setaria viridis
Sevir.5G463400 2.0kb downstream 2.0kb downstream 6951 true Chr_05: 45963120-45970070 Setaria viridis
Sevir.5G463400 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 45963120-45965119 Setaria viridis
Sevir.5G463400 5.0kb upstream 5.0kb upstream 9951 true Chr_05: 45965120-45975070 Setaria viridis
Sevir.5G463400 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 45970071-45975070 Setaria viridis
Sevir.5G463400 5.0kb downstream 5.0kb downstream 9951 true Chr_05: 45960120-45970070 Setaria viridis
Sevir.5G463400 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 45960120-45965119 Setaria viridis
Sevir.5G463400 10.0kb upstream 10.0kb upstream 14951 true Chr_05: 45965120-45980070 Setaria viridis
Sevir.5G463400 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 45970071-45980070 Setaria viridis
Sevir.5G463400 10.0kb downstream 10.0kb downstream 14951 true Chr_05: 45955120-45970070 Setaria viridis
Sevir.5G463400 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 45955120-45965119 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188321 5267 Panicoideae View MSA
124568850 5269 Grass View MSA
122048233 5273 Angiosperm View MSA
121345811 5274 Embryophyte View MSA
123380272 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain