Gene : Sevir.5G443600 S. viridis v2.1
Defline:  (1 of 4) PTHR11062//PTHR11062:SF105 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // BETA-1,4-XYLOSYLTRANSFERASE IRX10-RELATED Genomic Order:  4798
Name:  ? Sevir.5G443600 Secondary Identifier:  ? PAC:40631153
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5980 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G443600 0.5kb upstream 0.5kb upstream 5107 true Chr_05: 44801490-44806596 Setaria viridis
Sevir.5G443600 0.5kb upstream 0.5kb upstream 500 false Chr_05: 44806097-44806596 Setaria viridis
Sevir.5G443600 0.5kb downstream 0.5kb downstream 5107 true Chr_05: 44800990-44806096 Setaria viridis
Sevir.5G443600 0.5kb downstream 0.5kb downstream 500 false Chr_05: 44800990-44801489 Setaria viridis
Sevir.5G443600 1.0kb upstream 1.0kb upstream 5607 true Chr_05: 44801490-44807096 Setaria viridis
Sevir.5G443600 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 44806097-44807096 Setaria viridis
Sevir.5G443600 1.0kb downstream 1.0kb downstream 5607 true Chr_05: 44800490-44806096 Setaria viridis
Sevir.5G443600 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 44800490-44801489 Setaria viridis
Sevir.5G443600 2.0kb upstream 2.0kb upstream 6607 true Chr_05: 44801490-44808096 Setaria viridis
Sevir.5G443600 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 44806097-44808096 Setaria viridis
Sevir.5G443600 2.0kb downstream 2.0kb downstream 6607 true Chr_05: 44799490-44806096 Setaria viridis
Sevir.5G443600 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 44799490-44801489 Setaria viridis
Sevir.5G443600 5.0kb upstream 5.0kb upstream 9607 true Chr_05: 44801490-44811096 Setaria viridis
Sevir.5G443600 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 44806097-44811096 Setaria viridis
Sevir.5G443600 5.0kb downstream 5.0kb downstream 9607 true Chr_05: 44796490-44806096 Setaria viridis
Sevir.5G443600 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 44796490-44801489 Setaria viridis
Sevir.5G443600 10.0kb upstream 10.0kb upstream 14607 true Chr_05: 44801490-44816096 Setaria viridis
Sevir.5G443600 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 44806097-44816096 Setaria viridis
Sevir.5G443600 10.0kb downstream 10.0kb downstream 14607 true Chr_05: 44791490-44806096 Setaria viridis
Sevir.5G443600 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 44791490-44801489 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993246 5273 Angiosperm View MSA
122190236 5267 Panicoideae View MSA
124576376 5269 Grass View MSA
121263540 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain