Gene : Sevir.5G472900 S. viridis v2.1
Defline:  (1 of 1) PTHR11088//PTHR11088:SF26 - TRNA DELTA 2 -ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED // TRNA DIMETHYLALLYLTRANSFERASE 2 Genomic Order:  5124
Name:  ? Sevir.5G472900 Secondary Identifier:  ? PAC:40635380
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-2781 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G472900 0.5kb upstream 0.5kb upstream 3334 true Chr_05: 46461201-46464534 Setaria viridis
Sevir.5G472900 0.5kb upstream 0.5kb upstream 500 false Chr_05: 46461201-46461700 Setaria viridis
Sevir.5G472900 0.5kb downstream 0.5kb downstream 3334 true Chr_05: 46461701-46465034 Setaria viridis
Sevir.5G472900 0.5kb downstream 0.5kb downstream 500 false Chr_05: 46464535-46465034 Setaria viridis
Sevir.5G472900 1.0kb upstream 1.0kb upstream 3834 true Chr_05: 46460701-46464534 Setaria viridis
Sevir.5G472900 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 46460701-46461700 Setaria viridis
Sevir.5G472900 1.0kb downstream 1.0kb downstream 3834 true Chr_05: 46461701-46465534 Setaria viridis
Sevir.5G472900 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 46464535-46465534 Setaria viridis
Sevir.5G472900 2.0kb upstream 2.0kb upstream 4834 true Chr_05: 46459701-46464534 Setaria viridis
Sevir.5G472900 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 46459701-46461700 Setaria viridis
Sevir.5G472900 2.0kb downstream 2.0kb downstream 4834 true Chr_05: 46461701-46466534 Setaria viridis
Sevir.5G472900 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 46464535-46466534 Setaria viridis
Sevir.5G472900 5.0kb upstream 5.0kb upstream 7834 true Chr_05: 46456701-46464534 Setaria viridis
Sevir.5G472900 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 46456701-46461700 Setaria viridis
Sevir.5G472900 5.0kb downstream 5.0kb downstream 7834 true Chr_05: 46461701-46469534 Setaria viridis
Sevir.5G472900 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 46464535-46469534 Setaria viridis
Sevir.5G472900 10.0kb upstream 10.0kb upstream 12834 true Chr_05: 46451701-46464534 Setaria viridis
Sevir.5G472900 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 46451701-46461700 Setaria viridis
Sevir.5G472900 10.0kb downstream 10.0kb downstream 12834 true Chr_05: 46461701-46474534 Setaria viridis
Sevir.5G472900 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 46464535-46474534 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185785 5267 Panicoideae View MSA
124578987 5269 Grass View MSA
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain