Gene : Sevir.5G345200 S. viridis v2.1
Defline:  (1 of 5) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) Genomic Order:  3729
Name:  ? Sevir.5G345200 Secondary Identifier:  ? PAC:40629916
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7279 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G345200 0.5kb upstream 0.5kb upstream 5454 true Chr_05: 38177401-38182854 Setaria viridis
Sevir.5G345200 0.5kb upstream 0.5kb upstream 500 false Chr_05: 38177401-38177900 Setaria viridis
Sevir.5G345200 0.5kb downstream 0.5kb downstream 5454 true Chr_05: 38177901-38183354 Setaria viridis
Sevir.5G345200 0.5kb downstream 0.5kb downstream 500 false Chr_05: 38182855-38183354 Setaria viridis
Sevir.5G345200 1.0kb upstream 1.0kb upstream 5954 true Chr_05: 38176901-38182854 Setaria viridis
Sevir.5G345200 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 38176901-38177900 Setaria viridis
Sevir.5G345200 1.0kb downstream 1.0kb downstream 5954 true Chr_05: 38177901-38183854 Setaria viridis
Sevir.5G345200 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 38182855-38183854 Setaria viridis
Sevir.5G345200 2.0kb upstream 2.0kb upstream 6954 true Chr_05: 38175901-38182854 Setaria viridis
Sevir.5G345200 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 38175901-38177900 Setaria viridis
Sevir.5G345200 2.0kb downstream 2.0kb downstream 6954 true Chr_05: 38177901-38184854 Setaria viridis
Sevir.5G345200 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 38182855-38184854 Setaria viridis
Sevir.5G345200 5.0kb upstream 5.0kb upstream 9954 true Chr_05: 38172901-38182854 Setaria viridis
Sevir.5G345200 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 38172901-38177900 Setaria viridis
Sevir.5G345200 5.0kb downstream 5.0kb downstream 9954 true Chr_05: 38177901-38187854 Setaria viridis
Sevir.5G345200 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 38182855-38187854 Setaria viridis
Sevir.5G345200 10.0kb upstream 10.0kb upstream 14954 true Chr_05: 38167901-38182854 Setaria viridis
Sevir.5G345200 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 38167901-38177900 Setaria viridis
Sevir.5G345200 10.0kb downstream 10.0kb downstream 14954 true Chr_05: 38177901-38192854 Setaria viridis
Sevir.5G345200 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 38182855-38192854 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179937 5267 Panicoideae View MSA
124586360 5269 Grass View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain