Gene : Sevir.5G253100 S. viridis v2.1
Defline:  (1 of 7) K00026 - malate dehydrogenase (MDH2) Genomic Order:  2700
Name:  ? Sevir.5G253100 Secondary Identifier:  ? PAC:40629516
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis GLUCONEO-PWY Setaria viridis pathologic  
Sviridis GLYOXYLATE-BYPASS Setaria viridis pathologic  
Sviridis PWY-5464 Setaria viridis pathologic  
Sviridis PWY-561 Setaria viridis pathologic  
Sviridis PWY-5690 Setaria viridis pathologic  
Sviridis PWY-7115 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G253100 0.5kb upstream 0.5kb upstream 4074 true Chr_05: 30210551-30214624 Setaria viridis
Sevir.5G253100 0.5kb upstream 0.5kb upstream 500 false Chr_05: 30210551-30211050 Setaria viridis
Sevir.5G253100 0.5kb downstream 0.5kb downstream 4074 true Chr_05: 30211051-30215124 Setaria viridis
Sevir.5G253100 0.5kb downstream 0.5kb downstream 500 false Chr_05: 30214625-30215124 Setaria viridis
Sevir.5G253100 1.0kb upstream 1.0kb upstream 4574 true Chr_05: 30210051-30214624 Setaria viridis
Sevir.5G253100 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 30210051-30211050 Setaria viridis
Sevir.5G253100 1.0kb downstream 1.0kb downstream 4574 true Chr_05: 30211051-30215624 Setaria viridis
Sevir.5G253100 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 30214625-30215624 Setaria viridis
Sevir.5G253100 2.0kb upstream 2.0kb upstream 5574 true Chr_05: 30209051-30214624 Setaria viridis
Sevir.5G253100 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 30209051-30211050 Setaria viridis
Sevir.5G253100 2.0kb downstream 2.0kb downstream 5574 true Chr_05: 30211051-30216624 Setaria viridis
Sevir.5G253100 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 30214625-30216624 Setaria viridis
Sevir.5G253100 5.0kb upstream 5.0kb upstream 8574 true Chr_05: 30206051-30214624 Setaria viridis
Sevir.5G253100 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 30206051-30211050 Setaria viridis
Sevir.5G253100 5.0kb downstream 5.0kb downstream 8574 true Chr_05: 30211051-30219624 Setaria viridis
Sevir.5G253100 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 30214625-30219624 Setaria viridis
Sevir.5G253100 10.0kb upstream 10.0kb upstream 13574 true Chr_05: 30201051-30214624 Setaria viridis
Sevir.5G253100 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 30201051-30211050 Setaria viridis
Sevir.5G253100 10.0kb downstream 10.0kb downstream 13574 true Chr_05: 30211051-30224624 Setaria viridis
Sevir.5G253100 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 30214625-30224624 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191155 5267 Panicoideae View MSA
124588108 5269 Grass View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain