Gene : Sevir.5G336300 S. viridis v2.1
Defline:  (1 of 1) PTHR10949//PTHR10949:SF12 - LIPOYL SYNTHASE // LIPOYL SYNTHASE, CHLOROPLASTIC Genomic Order:  3631
Name:  ? Sevir.5G336300 Secondary Identifier:  ? PAC:40630832
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY0-501 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G336300 0.5kb upstream 0.5kb upstream 5302 true Chr_05: 37463083-37468384 Setaria viridis
Sevir.5G336300 0.5kb upstream 0.5kb upstream 500 false Chr_05: 37463083-37463582 Setaria viridis
Sevir.5G336300 0.5kb downstream 0.5kb downstream 5302 true Chr_05: 37463583-37468884 Setaria viridis
Sevir.5G336300 0.5kb downstream 0.5kb downstream 500 false Chr_05: 37468385-37468884 Setaria viridis
Sevir.5G336300 1.0kb upstream 1.0kb upstream 5802 true Chr_05: 37462583-37468384 Setaria viridis
Sevir.5G336300 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 37462583-37463582 Setaria viridis
Sevir.5G336300 1.0kb downstream 1.0kb downstream 5802 true Chr_05: 37463583-37469384 Setaria viridis
Sevir.5G336300 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 37468385-37469384 Setaria viridis
Sevir.5G336300 2.0kb upstream 2.0kb upstream 6802 true Chr_05: 37461583-37468384 Setaria viridis
Sevir.5G336300 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 37461583-37463582 Setaria viridis
Sevir.5G336300 2.0kb downstream 2.0kb downstream 6802 true Chr_05: 37463583-37470384 Setaria viridis
Sevir.5G336300 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 37468385-37470384 Setaria viridis
Sevir.5G336300 5.0kb upstream 5.0kb upstream 9802 true Chr_05: 37458583-37468384 Setaria viridis
Sevir.5G336300 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 37458583-37463582 Setaria viridis
Sevir.5G336300 5.0kb downstream 5.0kb downstream 9802 true Chr_05: 37463583-37473384 Setaria viridis
Sevir.5G336300 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 37468385-37473384 Setaria viridis
Sevir.5G336300 10.0kb upstream 10.0kb upstream 14802 true Chr_05: 37453583-37468384 Setaria viridis
Sevir.5G336300 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 37453583-37463582 Setaria viridis
Sevir.5G336300 10.0kb downstream 10.0kb downstream 14802 true Chr_05: 37463583-37478384 Setaria viridis
Sevir.5G336300 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 37468385-37478384 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041417 5273 Angiosperm View MSA
122177752 5267 Panicoideae View MSA
124585962 5269 Grass View MSA
121346374 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain