Gene : Sevir.5G313700 S. viridis v2.1
Defline:  (1 of 1) PTHR13697//PTHR13697:SF34 - PHOSPHOFRUCTOKINASE // SUBFAMILY NOT NAMED Genomic Order:  3392
Name:  ? Sevir.5G313700 Secondary Identifier:  ? PAC:40632470
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis ANAEROFRUCAT-PWY Setaria viridis pathologic  
Sviridis ANAGLYCOLYSIS-PWY Setaria viridis pathologic  
Sviridis PWY-1042 Setaria viridis pathologic  
Sviridis PWY-5464 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G313700 0.5kb upstream 0.5kb upstream 7888 true Chr_05: 35767932-35775819 Setaria viridis
Sevir.5G313700 0.5kb upstream 0.5kb upstream 500 false Chr_05: 35775320-35775819 Setaria viridis
Sevir.5G313700 0.5kb downstream 0.5kb downstream 7888 true Chr_05: 35767432-35775319 Setaria viridis
Sevir.5G313700 0.5kb downstream 0.5kb downstream 500 false Chr_05: 35767432-35767931 Setaria viridis
Sevir.5G313700 1.0kb upstream 1.0kb upstream 8388 true Chr_05: 35767932-35776319 Setaria viridis
Sevir.5G313700 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 35775320-35776319 Setaria viridis
Sevir.5G313700 1.0kb downstream 1.0kb downstream 8388 true Chr_05: 35766932-35775319 Setaria viridis
Sevir.5G313700 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 35766932-35767931 Setaria viridis
Sevir.5G313700 2.0kb upstream 2.0kb upstream 9388 true Chr_05: 35767932-35777319 Setaria viridis
Sevir.5G313700 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 35775320-35777319 Setaria viridis
Sevir.5G313700 2.0kb downstream 2.0kb downstream 9388 true Chr_05: 35765932-35775319 Setaria viridis
Sevir.5G313700 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 35765932-35767931 Setaria viridis
Sevir.5G313700 5.0kb upstream 5.0kb upstream 12388 true Chr_05: 35767932-35780319 Setaria viridis
Sevir.5G313700 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 35775320-35780319 Setaria viridis
Sevir.5G313700 5.0kb downstream 5.0kb downstream 12388 true Chr_05: 35762932-35775319 Setaria viridis
Sevir.5G313700 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 35762932-35767931 Setaria viridis
Sevir.5G313700 10.0kb upstream 10.0kb upstream 17388 true Chr_05: 35767932-35785319 Setaria viridis
Sevir.5G313700 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 35775320-35785319 Setaria viridis
Sevir.5G313700 10.0kb downstream 10.0kb downstream 17388 true Chr_05: 35757932-35775319 Setaria viridis
Sevir.5G313700 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 35757932-35767931 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176673 5267 Panicoideae View MSA
124588642 5269 Grass View MSA
122042097 5273 Angiosperm View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain