Gene : Sevir.5G229800 S. viridis v2.1

Defline:  (1 of 2) KOG3114 - Uncharacterized conserved protein Genomic Order:  2447
Name:  ? Sevir.5G229800 Secondary Identifier:  ? PAC:40629125

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G229800 0.5kb upstream 0.5kb upstream 3410 true Chr_05: 27793528-27796937 Setaria viridis
Sevir.5G229800 0.5kb upstream 0.5kb upstream 500 false Chr_05: 27796438-27796937 Setaria viridis
Sevir.5G229800 0.5kb downstream 0.5kb downstream 3410 true Chr_05: 27793028-27796437 Setaria viridis
Sevir.5G229800 0.5kb downstream 0.5kb downstream 500 false Chr_05: 27793028-27793527 Setaria viridis
Sevir.5G229800 1.0kb upstream 1.0kb upstream 3910 true Chr_05: 27793528-27797437 Setaria viridis
Sevir.5G229800 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 27796438-27797437 Setaria viridis
Sevir.5G229800 1.0kb downstream 1.0kb downstream 3910 true Chr_05: 27792528-27796437 Setaria viridis
Sevir.5G229800 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 27792528-27793527 Setaria viridis
Sevir.5G229800 2.0kb upstream 2.0kb upstream 4910 true Chr_05: 27793528-27798437 Setaria viridis
Sevir.5G229800 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 27796438-27798437 Setaria viridis
Sevir.5G229800 2.0kb downstream 2.0kb downstream 4910 true Chr_05: 27791528-27796437 Setaria viridis
Sevir.5G229800 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 27791528-27793527 Setaria viridis
Sevir.5G229800 5.0kb upstream 5.0kb upstream 7910 true Chr_05: 27793528-27801437 Setaria viridis
Sevir.5G229800 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 27796438-27801437 Setaria viridis
Sevir.5G229800 5.0kb downstream 5.0kb downstream 7910 true Chr_05: 27788528-27796437 Setaria viridis
Sevir.5G229800 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 27788528-27793527 Setaria viridis
Sevir.5G229800 10.0kb upstream 10.0kb upstream 12910 true Chr_05: 27793528-27806437 Setaria viridis
Sevir.5G229800 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 27796438-27806437 Setaria viridis
Sevir.5G229800 10.0kb downstream 10.0kb downstream 12910 true Chr_05: 27783528-27796437 Setaria viridis
Sevir.5G229800 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 27783528-27793527 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183776 5267 Panicoideae View MSA
124570968 5269 Grass View MSA
122045240 5273 Angiosperm View MSA
121344088 5274 Embryophyte View MSA
123427303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain