Gene : Sevir.5G248100 S. viridis v2.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF75 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  2641
Name:  ? Sevir.5G248100 Secondary Identifier:  ? PAC:40631138
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5980 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G248100 0.5kb upstream 0.5kb upstream 2027 true Chr_05: 29816084-29818110 Setaria viridis
Sevir.5G248100 0.5kb upstream 0.5kb upstream 500 false Chr_05: 29816084-29816583 Setaria viridis
Sevir.5G248100 0.5kb downstream 0.5kb downstream 2027 true Chr_05: 29816584-29818610 Setaria viridis
Sevir.5G248100 0.5kb downstream 0.5kb downstream 500 false Chr_05: 29818111-29818610 Setaria viridis
Sevir.5G248100 1.0kb upstream 1.0kb upstream 2527 true Chr_05: 29815584-29818110 Setaria viridis
Sevir.5G248100 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 29815584-29816583 Setaria viridis
Sevir.5G248100 1.0kb downstream 1.0kb downstream 2527 true Chr_05: 29816584-29819110 Setaria viridis
Sevir.5G248100 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 29818111-29819110 Setaria viridis
Sevir.5G248100 2.0kb upstream 2.0kb upstream 3527 true Chr_05: 29814584-29818110 Setaria viridis
Sevir.5G248100 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 29814584-29816583 Setaria viridis
Sevir.5G248100 2.0kb downstream 2.0kb downstream 3527 true Chr_05: 29816584-29820110 Setaria viridis
Sevir.5G248100 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 29818111-29820110 Setaria viridis
Sevir.5G248100 5.0kb upstream 5.0kb upstream 6527 true Chr_05: 29811584-29818110 Setaria viridis
Sevir.5G248100 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 29811584-29816583 Setaria viridis
Sevir.5G248100 5.0kb downstream 5.0kb downstream 6527 true Chr_05: 29816584-29823110 Setaria viridis
Sevir.5G248100 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 29818111-29823110 Setaria viridis
Sevir.5G248100 10.0kb upstream 10.0kb upstream 11527 true Chr_05: 29806584-29818110 Setaria viridis
Sevir.5G248100 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 29806584-29816583 Setaria viridis
Sevir.5G248100 10.0kb downstream 10.0kb downstream 11527 true Chr_05: 29816584-29828110 Setaria viridis
Sevir.5G248100 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 29818111-29828110 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198769 5267 Panicoideae View MSA
124573490 5269 Grass View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain