Gene : Sevir.5G048900 S. viridis v2.1
Defline:  (1 of 1) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Genomic Order:  526
Name:  ? Sevir.5G048900 Secondary Identifier:  ? PAC:40629121
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G048900 0.5kb upstream 0.5kb upstream 7269 true Chr_05: 3849059-3856327 Setaria viridis
Sevir.5G048900 0.5kb upstream 0.5kb upstream 500 false Chr_05: 3849059-3849558 Setaria viridis
Sevir.5G048900 0.5kb downstream 0.5kb downstream 7269 true Chr_05: 3849559-3856827 Setaria viridis
Sevir.5G048900 0.5kb downstream 0.5kb downstream 500 false Chr_05: 3856328-3856827 Setaria viridis
Sevir.5G048900 1.0kb upstream 1.0kb upstream 7769 true Chr_05: 3848559-3856327 Setaria viridis
Sevir.5G048900 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 3848559-3849558 Setaria viridis
Sevir.5G048900 1.0kb downstream 1.0kb downstream 7769 true Chr_05: 3849559-3857327 Setaria viridis
Sevir.5G048900 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 3856328-3857327 Setaria viridis
Sevir.5G048900 2.0kb upstream 2.0kb upstream 8769 true Chr_05: 3847559-3856327 Setaria viridis
Sevir.5G048900 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 3847559-3849558 Setaria viridis
Sevir.5G048900 2.0kb downstream 2.0kb downstream 8769 true Chr_05: 3849559-3858327 Setaria viridis
Sevir.5G048900 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 3856328-3858327 Setaria viridis
Sevir.5G048900 5.0kb upstream 5.0kb upstream 11769 true Chr_05: 3844559-3856327 Setaria viridis
Sevir.5G048900 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 3844559-3849558 Setaria viridis
Sevir.5G048900 5.0kb downstream 5.0kb downstream 11769 true Chr_05: 3849559-3861327 Setaria viridis
Sevir.5G048900 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 3856328-3861327 Setaria viridis
Sevir.5G048900 10.0kb upstream 10.0kb upstream 16769 true Chr_05: 3839559-3856327 Setaria viridis
Sevir.5G048900 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 3839559-3849558 Setaria viridis
Sevir.5G048900 10.0kb downstream 10.0kb downstream 16769 true Chr_05: 3849559-3866327 Setaria viridis
Sevir.5G048900 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 3856328-3866327 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184336 5267 Panicoideae View MSA
124572269 5269 Grass View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain