Gene : Sevir.5G116200 S. viridis v2.1
Defline:  (1 of 1) PTHR16212:SF4 - FOCADHESIN Genomic Order:  1275
Name:  ? Sevir.5G116200 Secondary Identifier:  ? PAC:40632919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G116200 0.5kb upstream 0.5kb upstream 14822 true Chr_05: 9442348-9457169 Setaria viridis
Sevir.5G116200 0.5kb upstream 0.5kb upstream 500 false Chr_05: 9456670-9457169 Setaria viridis
Sevir.5G116200 0.5kb downstream 0.5kb downstream 14822 true Chr_05: 9441848-9456669 Setaria viridis
Sevir.5G116200 0.5kb downstream 0.5kb downstream 500 false Chr_05: 9441848-9442347 Setaria viridis
Sevir.5G116200 1.0kb upstream 1.0kb upstream 15322 true Chr_05: 9442348-9457669 Setaria viridis
Sevir.5G116200 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 9456670-9457669 Setaria viridis
Sevir.5G116200 1.0kb downstream 1.0kb downstream 15322 true Chr_05: 9441348-9456669 Setaria viridis
Sevir.5G116200 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 9441348-9442347 Setaria viridis
Sevir.5G116200 2.0kb upstream 2.0kb upstream 16322 true Chr_05: 9442348-9458669 Setaria viridis
Sevir.5G116200 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 9456670-9458669 Setaria viridis
Sevir.5G116200 2.0kb downstream 2.0kb downstream 16322 true Chr_05: 9440348-9456669 Setaria viridis
Sevir.5G116200 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 9440348-9442347 Setaria viridis
Sevir.5G116200 5.0kb upstream 5.0kb upstream 19322 true Chr_05: 9442348-9461669 Setaria viridis
Sevir.5G116200 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 9456670-9461669 Setaria viridis
Sevir.5G116200 5.0kb downstream 5.0kb downstream 19322 true Chr_05: 9437348-9456669 Setaria viridis
Sevir.5G116200 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 9437348-9442347 Setaria viridis
Sevir.5G116200 10.0kb upstream 10.0kb upstream 24322 true Chr_05: 9442348-9466669 Setaria viridis
Sevir.5G116200 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 9456670-9466669 Setaria viridis
Sevir.5G116200 10.0kb downstream 10.0kb downstream 24322 true Chr_05: 9432348-9456669 Setaria viridis
Sevir.5G116200 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 9432348-9442347 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191000 5267 Panicoideae View MSA
124585241 5269 Grass View MSA
122044820 5273 Angiosperm View MSA
121344294 5274 Embryophyte View MSA
123424915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain