Gene : Sevir.5G066200 S. viridis v2.1
Defline:  (1 of 1) PTHR31956//PTHR31956:SF2 - FAMILY NOT NAMED // NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  723
Name:  ? Sevir.5G066200 Secondary Identifier:  ? PAC:40628969
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis LIPASYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G066200 0.5kb upstream 0.5kb upstream 3299 true Chr_05: 5199763-5203061 Setaria viridis
Sevir.5G066200 0.5kb upstream 0.5kb upstream 500 false Chr_05: 5202562-5203061 Setaria viridis
Sevir.5G066200 0.5kb downstream 0.5kb downstream 3299 true Chr_05: 5199263-5202561 Setaria viridis
Sevir.5G066200 0.5kb downstream 0.5kb downstream 500 false Chr_05: 5199263-5199762 Setaria viridis
Sevir.5G066200 1.0kb upstream 1.0kb upstream 3799 true Chr_05: 5199763-5203561 Setaria viridis
Sevir.5G066200 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 5202562-5203561 Setaria viridis
Sevir.5G066200 1.0kb downstream 1.0kb downstream 3799 true Chr_05: 5198763-5202561 Setaria viridis
Sevir.5G066200 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 5198763-5199762 Setaria viridis
Sevir.5G066200 2.0kb upstream 2.0kb upstream 4799 true Chr_05: 5199763-5204561 Setaria viridis
Sevir.5G066200 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 5202562-5204561 Setaria viridis
Sevir.5G066200 2.0kb downstream 2.0kb downstream 4799 true Chr_05: 5197763-5202561 Setaria viridis
Sevir.5G066200 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 5197763-5199762 Setaria viridis
Sevir.5G066200 5.0kb upstream 5.0kb upstream 7799 true Chr_05: 5199763-5207561 Setaria viridis
Sevir.5G066200 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 5202562-5207561 Setaria viridis
Sevir.5G066200 5.0kb downstream 5.0kb downstream 7799 true Chr_05: 5194763-5202561 Setaria viridis
Sevir.5G066200 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 5194763-5199762 Setaria viridis
Sevir.5G066200 10.0kb upstream 10.0kb upstream 12799 true Chr_05: 5199763-5212561 Setaria viridis
Sevir.5G066200 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 5202562-5212561 Setaria viridis
Sevir.5G066200 10.0kb downstream 10.0kb downstream 12799 true Chr_05: 5189763-5202561 Setaria viridis
Sevir.5G066200 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 5189763-5199762 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184636 5267 Panicoideae View MSA
124577445 5269 Grass View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain