Gene : Sevir.5G044700 S. viridis v2.1
Defline:  (1 of 1) PTHR15245:SF23 - PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1-RELATED Genomic Order:  482
Name:  ? Sevir.5G044700 Secondary Identifier:  ? PAC:40634810
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6351 Setaria viridis pathologic  
Sviridis PWY-6352 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G044700 0.5kb upstream 0.5kb upstream 1865 true Chr_05: 3469051-3470915 Setaria viridis
Sevir.5G044700 0.5kb upstream 0.5kb upstream 500 false Chr_05: 3470416-3470915 Setaria viridis
Sevir.5G044700 0.5kb downstream 0.5kb downstream 1865 true Chr_05: 3468551-3470415 Setaria viridis
Sevir.5G044700 0.5kb downstream 0.5kb downstream 500 false Chr_05: 3468551-3469050 Setaria viridis
Sevir.5G044700 1.0kb upstream 1.0kb upstream 2365 true Chr_05: 3469051-3471415 Setaria viridis
Sevir.5G044700 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 3470416-3471415 Setaria viridis
Sevir.5G044700 1.0kb downstream 1.0kb downstream 2365 true Chr_05: 3468051-3470415 Setaria viridis
Sevir.5G044700 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 3468051-3469050 Setaria viridis
Sevir.5G044700 2.0kb upstream 2.0kb upstream 3365 true Chr_05: 3469051-3472415 Setaria viridis
Sevir.5G044700 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 3470416-3472415 Setaria viridis
Sevir.5G044700 2.0kb downstream 2.0kb downstream 3365 true Chr_05: 3467051-3470415 Setaria viridis
Sevir.5G044700 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 3467051-3469050 Setaria viridis
Sevir.5G044700 5.0kb upstream 5.0kb upstream 6365 true Chr_05: 3469051-3475415 Setaria viridis
Sevir.5G044700 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 3470416-3475415 Setaria viridis
Sevir.5G044700 5.0kb downstream 5.0kb downstream 6365 true Chr_05: 3464051-3470415 Setaria viridis
Sevir.5G044700 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 3464051-3469050 Setaria viridis
Sevir.5G044700 10.0kb upstream 10.0kb upstream 11365 true Chr_05: 3469051-3480415 Setaria viridis
Sevir.5G044700 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 3470416-3480415 Setaria viridis
Sevir.5G044700 10.0kb downstream 10.0kb downstream 11365 true Chr_05: 3459051-3470415 Setaria viridis
Sevir.5G044700 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 3459051-3469050 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028211 5273 Angiosperm View MSA
122183755 5267 Panicoideae View MSA
124586794 5269 Grass View MSA
123429040 5275 Viridiplantae View MSA
121297732 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain