Gene : Sevir.2G401000 S. viridis v2.1
Defline:  (1 of 3) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  4368
Name:  ? Sevir.2G401000 Secondary Identifier:  ? PAC:40624279
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5097 Setaria viridis pathologic  
Sviridis PWY-724 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G401000 0.5kb upstream 0.5kb upstream 4102 true Chr_02: 44428158-44432259 Setaria viridis
Sevir.2G401000 0.5kb upstream 0.5kb upstream 500 false Chr_02: 44431760-44432259 Setaria viridis
Sevir.2G401000 0.5kb downstream 0.5kb downstream 4102 true Chr_02: 44427658-44431759 Setaria viridis
Sevir.2G401000 0.5kb downstream 0.5kb downstream 500 false Chr_02: 44427658-44428157 Setaria viridis
Sevir.2G401000 1.0kb upstream 1.0kb upstream 4602 true Chr_02: 44428158-44432759 Setaria viridis
Sevir.2G401000 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 44431760-44432759 Setaria viridis
Sevir.2G401000 1.0kb downstream 1.0kb downstream 4602 true Chr_02: 44427158-44431759 Setaria viridis
Sevir.2G401000 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 44427158-44428157 Setaria viridis
Sevir.2G401000 2.0kb upstream 2.0kb upstream 5602 true Chr_02: 44428158-44433759 Setaria viridis
Sevir.2G401000 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 44431760-44433759 Setaria viridis
Sevir.2G401000 2.0kb downstream 2.0kb downstream 5602 true Chr_02: 44426158-44431759 Setaria viridis
Sevir.2G401000 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 44426158-44428157 Setaria viridis
Sevir.2G401000 5.0kb upstream 5.0kb upstream 8602 true Chr_02: 44428158-44436759 Setaria viridis
Sevir.2G401000 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 44431760-44436759 Setaria viridis
Sevir.2G401000 5.0kb downstream 5.0kb downstream 8602 true Chr_02: 44423158-44431759 Setaria viridis
Sevir.2G401000 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 44423158-44428157 Setaria viridis
Sevir.2G401000 10.0kb upstream 10.0kb upstream 13602 true Chr_02: 44428158-44441759 Setaria viridis
Sevir.2G401000 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 44431760-44441759 Setaria viridis
Sevir.2G401000 10.0kb downstream 10.0kb downstream 13602 true Chr_02: 44418158-44431759 Setaria viridis
Sevir.2G401000 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 44418158-44428157 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122064518 5267 Panicoideae View MSA
124590449 5269 Grass View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain