Gene : Sevir.2G250300 S. viridis v2.1
Defline:  (1 of 1) 6.3.2.6 - Phosphoribosylaminoimidazolesuccinocarboxamide synthase / SAICARs Genomic Order:  2729
Name:  ? Sevir.2G250300 Secondary Identifier:  ? PAC:40625134
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6124 Setaria viridis pathologic  
Sviridis PWY-841 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G250300 0.5kb upstream 0.5kb upstream 4729 true Chr_02: 33335876-33340604 Setaria viridis
Sevir.2G250300 0.5kb upstream 0.5kb upstream 500 false Chr_02: 33340105-33340604 Setaria viridis
Sevir.2G250300 0.5kb downstream 0.5kb downstream 4729 true Chr_02: 33335376-33340104 Setaria viridis
Sevir.2G250300 0.5kb downstream 0.5kb downstream 500 false Chr_02: 33335376-33335875 Setaria viridis
Sevir.2G250300 1.0kb upstream 1.0kb upstream 5229 true Chr_02: 33335876-33341104 Setaria viridis
Sevir.2G250300 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 33340105-33341104 Setaria viridis
Sevir.2G250300 1.0kb downstream 1.0kb downstream 5229 true Chr_02: 33334876-33340104 Setaria viridis
Sevir.2G250300 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 33334876-33335875 Setaria viridis
Sevir.2G250300 2.0kb upstream 2.0kb upstream 6229 true Chr_02: 33335876-33342104 Setaria viridis
Sevir.2G250300 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 33340105-33342104 Setaria viridis
Sevir.2G250300 2.0kb downstream 2.0kb downstream 6229 true Chr_02: 33333876-33340104 Setaria viridis
Sevir.2G250300 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 33333876-33335875 Setaria viridis
Sevir.2G250300 5.0kb upstream 5.0kb upstream 9229 true Chr_02: 33335876-33345104 Setaria viridis
Sevir.2G250300 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 33340105-33345104 Setaria viridis
Sevir.2G250300 5.0kb downstream 5.0kb downstream 9229 true Chr_02: 33330876-33340104 Setaria viridis
Sevir.2G250300 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 33330876-33335875 Setaria viridis
Sevir.2G250300 10.0kb upstream 10.0kb upstream 14229 true Chr_02: 33335876-33350104 Setaria viridis
Sevir.2G250300 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 33340105-33350104 Setaria viridis
Sevir.2G250300 10.0kb downstream 10.0kb downstream 14229 true Chr_02: 33325876-33340104 Setaria viridis
Sevir.2G250300 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 33325876-33335875 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195109 5267 Panicoideae View MSA
124589731 5269 Grass View MSA
122044442 5273 Angiosperm View MSA
121346335 5274 Embryophyte View MSA
123424061 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain