Gene : Sevir.2G068100 S. viridis v2.1
Defline:  (1 of 4) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  757
Name:  ? Sevir.2G068100 Secondary Identifier:  ? PAC:40625219
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-2541 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G068100 0.5kb upstream 0.5kb upstream 8669 true Chr_02: 5572475-5581143 Setaria viridis
Sevir.2G068100 0.5kb upstream 0.5kb upstream 500 false Chr_02: 5572475-5572974 Setaria viridis
Sevir.2G068100 0.5kb downstream 0.5kb downstream 8669 true Chr_02: 5572975-5581643 Setaria viridis
Sevir.2G068100 0.5kb downstream 0.5kb downstream 500 false Chr_02: 5581144-5581643 Setaria viridis
Sevir.2G068100 1.0kb upstream 1.0kb upstream 9169 true Chr_02: 5571975-5581143 Setaria viridis
Sevir.2G068100 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 5571975-5572974 Setaria viridis
Sevir.2G068100 1.0kb downstream 1.0kb downstream 9169 true Chr_02: 5572975-5582143 Setaria viridis
Sevir.2G068100 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 5581144-5582143 Setaria viridis
Sevir.2G068100 2.0kb upstream 2.0kb upstream 10169 true Chr_02: 5570975-5581143 Setaria viridis
Sevir.2G068100 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 5570975-5572974 Setaria viridis
Sevir.2G068100 2.0kb downstream 2.0kb downstream 10169 true Chr_02: 5572975-5583143 Setaria viridis
Sevir.2G068100 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 5581144-5583143 Setaria viridis
Sevir.2G068100 5.0kb upstream 5.0kb upstream 13169 true Chr_02: 5567975-5581143 Setaria viridis
Sevir.2G068100 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 5567975-5572974 Setaria viridis
Sevir.2G068100 5.0kb downstream 5.0kb downstream 13169 true Chr_02: 5572975-5586143 Setaria viridis
Sevir.2G068100 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 5581144-5586143 Setaria viridis
Sevir.2G068100 10.0kb upstream 10.0kb upstream 18169 true Chr_02: 5562975-5581143 Setaria viridis
Sevir.2G068100 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 5562975-5572974 Setaria viridis
Sevir.2G068100 10.0kb downstream 10.0kb downstream 18169 true Chr_02: 5572975-5591143 Setaria viridis
Sevir.2G068100 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 5581144-5591143 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
122201167 5267 Panicoideae View MSA
124590016 5269 Grass View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain