Gene : Sevir.2G121300 S. viridis v2.1
Defline:  (1 of 3) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  1338
Name:  ? Sevir.2G121300 Secondary Identifier:  ? PAC:40622550
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-4942 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G121300 0.5kb upstream 0.5kb upstream 8209 true Chr_02: 12038752-12046960 Setaria viridis
Sevir.2G121300 0.5kb upstream 0.5kb upstream 500 false Chr_02: 12046461-12046960 Setaria viridis
Sevir.2G121300 0.5kb downstream 0.5kb downstream 8209 true Chr_02: 12038252-12046460 Setaria viridis
Sevir.2G121300 0.5kb downstream 0.5kb downstream 500 false Chr_02: 12038252-12038751 Setaria viridis
Sevir.2G121300 1.0kb upstream 1.0kb upstream 8709 true Chr_02: 12038752-12047460 Setaria viridis
Sevir.2G121300 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 12046461-12047460 Setaria viridis
Sevir.2G121300 1.0kb downstream 1.0kb downstream 8709 true Chr_02: 12037752-12046460 Setaria viridis
Sevir.2G121300 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 12037752-12038751 Setaria viridis
Sevir.2G121300 2.0kb upstream 2.0kb upstream 9709 true Chr_02: 12038752-12048460 Setaria viridis
Sevir.2G121300 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 12046461-12048460 Setaria viridis
Sevir.2G121300 2.0kb downstream 2.0kb downstream 9709 true Chr_02: 12036752-12046460 Setaria viridis
Sevir.2G121300 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 12036752-12038751 Setaria viridis
Sevir.2G121300 5.0kb upstream 5.0kb upstream 12709 true Chr_02: 12038752-12051460 Setaria viridis
Sevir.2G121300 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 12046461-12051460 Setaria viridis
Sevir.2G121300 5.0kb downstream 5.0kb downstream 12709 true Chr_02: 12033752-12046460 Setaria viridis
Sevir.2G121300 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 12033752-12038751 Setaria viridis
Sevir.2G121300 10.0kb upstream 10.0kb upstream 17709 true Chr_02: 12038752-12056460 Setaria viridis
Sevir.2G121300 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 12046461-12056460 Setaria viridis
Sevir.2G121300 10.0kb downstream 10.0kb downstream 17709 true Chr_02: 12028752-12046460 Setaria viridis
Sevir.2G121300 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 12028752-12038751 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194828 5267 Panicoideae View MSA
124466811 5269 Grass View MSA
122047395 5273 Angiosperm View MSA
121346129 5274 Embryophyte View MSA
123428105 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain