Gene : Sevir.1G004500 S. viridis v2.1
Defline:  (1 of 2) 1.1.1.27 - L-lactate dehydrogenase / L-lactic dehydrogenase Genomic Order:  45
Name:  ? Sevir.1G004500 Secondary Identifier:  ? PAC:40604474
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis ANAEROFRUCAT-PWY Setaria viridis pathologic  
Sviridis PWY-5481 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G004500 0.5kb upstream 0.5kb upstream 1850 true Chr_01: 271916-273765 Setaria viridis
Sevir.1G004500 0.5kb upstream 0.5kb upstream 500 false Chr_01: 271916-272415 Setaria viridis
Sevir.1G004500 0.5kb downstream 0.5kb downstream 1850 true Chr_01: 272416-274265 Setaria viridis
Sevir.1G004500 0.5kb downstream 0.5kb downstream 500 false Chr_01: 273766-274265 Setaria viridis
Sevir.1G004500 1.0kb upstream 1.0kb upstream 2350 true Chr_01: 271416-273765 Setaria viridis
Sevir.1G004500 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 271416-272415 Setaria viridis
Sevir.1G004500 1.0kb downstream 1.0kb downstream 2350 true Chr_01: 272416-274765 Setaria viridis
Sevir.1G004500 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 273766-274765 Setaria viridis
Sevir.1G004500 2.0kb upstream 2.0kb upstream 3350 true Chr_01: 270416-273765 Setaria viridis
Sevir.1G004500 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 270416-272415 Setaria viridis
Sevir.1G004500 2.0kb downstream 2.0kb downstream 3350 true Chr_01: 272416-275765 Setaria viridis
Sevir.1G004500 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 273766-275765 Setaria viridis
Sevir.1G004500 5.0kb upstream 5.0kb upstream 6350 true Chr_01: 267416-273765 Setaria viridis
Sevir.1G004500 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 267416-272415 Setaria viridis
Sevir.1G004500 5.0kb downstream 5.0kb downstream 6350 true Chr_01: 272416-278765 Setaria viridis
Sevir.1G004500 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 273766-278765 Setaria viridis
Sevir.1G004500 10.0kb upstream 10.0kb upstream 11350 true Chr_01: 262416-273765 Setaria viridis
Sevir.1G004500 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 262416-272415 Setaria viridis
Sevir.1G004500 10.0kb downstream 10.0kb downstream 11350 true Chr_01: 272416-283765 Setaria viridis
Sevir.1G004500 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 273766-283765 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196123 5267 Panicoideae View MSA
124573849 5269 Grass View MSA
122045770 5273 Angiosperm View MSA
121350532 5274 Embryophyte View MSA
123381776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain