Gene : Sevir.1G004700 S. viridis v2.1
Defline:  (1 of 2) PF00251//PF08244//PF11837 - Glycosyl hydrolases family 32 N-terminal domain (Glyco_hydro_32N) // Glycosyl hydrolases family 32 C terminal (Glyco_hydro_32C) // Domain of unknown function (DUF3357) (DUF3357) Genomic Order:  47
Name:  ? Sevir.1G004700 Secondary Identifier:  ? PAC:40609330
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-621 Setaria viridis pathologic  
Sviridis PWY66-373 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G004700 0.5kb upstream 0.5kb upstream 4064 true Chr_01: 287557-291620 Setaria viridis
Sevir.1G004700 0.5kb upstream 0.5kb upstream 500 false Chr_01: 287557-288056 Setaria viridis
Sevir.1G004700 0.5kb downstream 0.5kb downstream 4064 true Chr_01: 288057-292120 Setaria viridis
Sevir.1G004700 0.5kb downstream 0.5kb downstream 500 false Chr_01: 291621-292120 Setaria viridis
Sevir.1G004700 1.0kb upstream 1.0kb upstream 4564 true Chr_01: 287057-291620 Setaria viridis
Sevir.1G004700 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 287057-288056 Setaria viridis
Sevir.1G004700 1.0kb downstream 1.0kb downstream 4564 true Chr_01: 288057-292620 Setaria viridis
Sevir.1G004700 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 291621-292620 Setaria viridis
Sevir.1G004700 2.0kb upstream 2.0kb upstream 5564 true Chr_01: 286057-291620 Setaria viridis
Sevir.1G004700 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 286057-288056 Setaria viridis
Sevir.1G004700 2.0kb downstream 2.0kb downstream 5564 true Chr_01: 288057-293620 Setaria viridis
Sevir.1G004700 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 291621-293620 Setaria viridis
Sevir.1G004700 5.0kb upstream 5.0kb upstream 8564 true Chr_01: 283057-291620 Setaria viridis
Sevir.1G004700 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 283057-288056 Setaria viridis
Sevir.1G004700 5.0kb downstream 5.0kb downstream 8564 true Chr_01: 288057-296620 Setaria viridis
Sevir.1G004700 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 291621-296620 Setaria viridis
Sevir.1G004700 10.0kb upstream 10.0kb upstream 13564 true Chr_01: 278057-291620 Setaria viridis
Sevir.1G004700 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 278057-288056 Setaria viridis
Sevir.1G004700 10.0kb downstream 10.0kb downstream 13564 true Chr_01: 288057-301620 Setaria viridis
Sevir.1G004700 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 291621-301620 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186044 5267 Panicoideae View MSA
124579786 5269 Grass View MSA
122044228 5273 Angiosperm View MSA
121350675 5274 Embryophyte View MSA
123428659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain