Gene : Sevir.1G019600 S. viridis v2.1
Defline:  (1 of 1) PTHR12741:SF22 - CALLOSE SYNTHASE 8-RELATED Genomic Order:  212
Name:  ? Sevir.1G019600 Secondary Identifier:  ? PAC:40607644
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6773 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G019600 0.5kb upstream 0.5kb upstream 22726 true Chr_01: 1643323-1666048 Setaria viridis
Sevir.1G019600 0.5kb upstream 0.5kb upstream 500 false Chr_01: 1665549-1666048 Setaria viridis
Sevir.1G019600 0.5kb downstream 0.5kb downstream 22726 true Chr_01: 1642823-1665548 Setaria viridis
Sevir.1G019600 0.5kb downstream 0.5kb downstream 500 false Chr_01: 1642823-1643322 Setaria viridis
Sevir.1G019600 1.0kb upstream 1.0kb upstream 23226 true Chr_01: 1643323-1666548 Setaria viridis
Sevir.1G019600 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 1665549-1666548 Setaria viridis
Sevir.1G019600 1.0kb downstream 1.0kb downstream 23226 true Chr_01: 1642323-1665548 Setaria viridis
Sevir.1G019600 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 1642323-1643322 Setaria viridis
Sevir.1G019600 2.0kb upstream 2.0kb upstream 24226 true Chr_01: 1643323-1667548 Setaria viridis
Sevir.1G019600 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 1665549-1667548 Setaria viridis
Sevir.1G019600 2.0kb downstream 2.0kb downstream 24226 true Chr_01: 1641323-1665548 Setaria viridis
Sevir.1G019600 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 1641323-1643322 Setaria viridis
Sevir.1G019600 5.0kb upstream 5.0kb upstream 27226 true Chr_01: 1643323-1670548 Setaria viridis
Sevir.1G019600 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 1665549-1670548 Setaria viridis
Sevir.1G019600 5.0kb downstream 5.0kb downstream 27226 true Chr_01: 1638323-1665548 Setaria viridis
Sevir.1G019600 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 1638323-1643322 Setaria viridis
Sevir.1G019600 10.0kb upstream 10.0kb upstream 32226 true Chr_01: 1643323-1675548 Setaria viridis
Sevir.1G019600 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 1665549-1675548 Setaria viridis
Sevir.1G019600 10.0kb downstream 10.0kb downstream 32226 true Chr_01: 1633323-1665548 Setaria viridis
Sevir.1G019600 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 1633323-1643322 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191843 5267 Panicoideae View MSA
124589873 5269 Grass View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain