Gene : Sevir.1G033200 S. viridis v2.1
Defline:  (1 of 1) PTHR11533//PTHR11533:SF189 - PROTEASE M1 ZINC METALLOPROTEASE // SUBFAMILY NOT NAMED Genomic Order:  355
Name:  ? Sevir.1G033200 Secondary Identifier:  ? PAC:40604457
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-6842 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G033200 0.5kb upstream 0.5kb upstream 7962 true Chr_01: 2975864-2983825 Setaria viridis
Sevir.1G033200 0.5kb upstream 0.5kb upstream 500 false Chr_01: 2975864-2976363 Setaria viridis
Sevir.1G033200 0.5kb downstream 0.5kb downstream 7962 true Chr_01: 2976364-2984325 Setaria viridis
Sevir.1G033200 0.5kb downstream 0.5kb downstream 500 false Chr_01: 2983826-2984325 Setaria viridis
Sevir.1G033200 1.0kb upstream 1.0kb upstream 8462 true Chr_01: 2975364-2983825 Setaria viridis
Sevir.1G033200 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 2975364-2976363 Setaria viridis
Sevir.1G033200 1.0kb downstream 1.0kb downstream 8462 true Chr_01: 2976364-2984825 Setaria viridis
Sevir.1G033200 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 2983826-2984825 Setaria viridis
Sevir.1G033200 2.0kb upstream 2.0kb upstream 9462 true Chr_01: 2974364-2983825 Setaria viridis
Sevir.1G033200 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 2974364-2976363 Setaria viridis
Sevir.1G033200 2.0kb downstream 2.0kb downstream 9462 true Chr_01: 2976364-2985825 Setaria viridis
Sevir.1G033200 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 2983826-2985825 Setaria viridis
Sevir.1G033200 5.0kb upstream 5.0kb upstream 12462 true Chr_01: 2971364-2983825 Setaria viridis
Sevir.1G033200 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 2971364-2976363 Setaria viridis
Sevir.1G033200 5.0kb downstream 5.0kb downstream 12462 true Chr_01: 2976364-2988825 Setaria viridis
Sevir.1G033200 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 2983826-2988825 Setaria viridis
Sevir.1G033200 10.0kb upstream 10.0kb upstream 17462 true Chr_01: 2966364-2983825 Setaria viridis
Sevir.1G033200 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 2966364-2976363 Setaria viridis
Sevir.1G033200 10.0kb downstream 10.0kb downstream 17462 true Chr_01: 2976364-2993825 Setaria viridis
Sevir.1G033200 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 2983826-2993825 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186257 5267 Panicoideae View MSA
124576141 5269 Grass View MSA
122045992 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain