Gene : Sevir.1G130600 S. viridis v2.1
Defline:  (1 of 2) PTHR10315//PTHR10315:SF34 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED Genomic Order:  1449
Name:  ? Sevir.1G130600 Secondary Identifier:  ? PAC:40608505
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G130600 0.5kb upstream 0.5kb upstream 7593 true Chr_01: 12293386-12300978 Setaria viridis
Sevir.1G130600 0.5kb upstream 0.5kb upstream 500 false Chr_01: 12300479-12300978 Setaria viridis
Sevir.1G130600 0.5kb downstream 0.5kb downstream 7593 true Chr_01: 12292886-12300478 Setaria viridis
Sevir.1G130600 0.5kb downstream 0.5kb downstream 500 false Chr_01: 12292886-12293385 Setaria viridis
Sevir.1G130600 1.0kb upstream 1.0kb upstream 8093 true Chr_01: 12293386-12301478 Setaria viridis
Sevir.1G130600 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 12300479-12301478 Setaria viridis
Sevir.1G130600 1.0kb downstream 1.0kb downstream 8093 true Chr_01: 12292386-12300478 Setaria viridis
Sevir.1G130600 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 12292386-12293385 Setaria viridis
Sevir.1G130600 2.0kb upstream 2.0kb upstream 9093 true Chr_01: 12293386-12302478 Setaria viridis
Sevir.1G130600 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 12300479-12302478 Setaria viridis
Sevir.1G130600 2.0kb downstream 2.0kb downstream 9093 true Chr_01: 12291386-12300478 Setaria viridis
Sevir.1G130600 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 12291386-12293385 Setaria viridis
Sevir.1G130600 5.0kb upstream 5.0kb upstream 12093 true Chr_01: 12293386-12305478 Setaria viridis
Sevir.1G130600 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 12300479-12305478 Setaria viridis
Sevir.1G130600 5.0kb downstream 5.0kb downstream 12093 true Chr_01: 12288386-12300478 Setaria viridis
Sevir.1G130600 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 12288386-12293385 Setaria viridis
Sevir.1G130600 10.0kb upstream 10.0kb upstream 17093 true Chr_01: 12293386-12310478 Setaria viridis
Sevir.1G130600 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 12300479-12310478 Setaria viridis
Sevir.1G130600 10.0kb downstream 10.0kb downstream 17093 true Chr_01: 12283386-12300478 Setaria viridis
Sevir.1G130600 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 12283386-12293385 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196006 5267 Panicoideae View MSA
124586417 5269 Grass View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain