Gene : Sevir.1G121000 S. viridis v2.1
Defline:  (1 of 2) PTHR23309//PTHR23309:SF10 - 3-HYDROXYACYL-COA DEHYROGENASE // PEROXISOMAL FATTY ACID BETA-OXIDATION MULTIFUNCTIONAL PROTEIN AIM1 Genomic Order:  1341
Name:  ? Sevir.1G121000 Secondary Identifier:  ? PAC:40606516
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis ILEUDEG-PWY Setaria viridis pathologic  
Sviridis PWY-5136 Setaria viridis pathologic  
Sviridis PWY-5137 Setaria viridis pathologic  
Sviridis PWY-5138 Setaria viridis pathologic  
Sviridis PWY-561 Setaria viridis pathologic  
Sviridis PWY-6435 Setaria viridis pathologic  
Sviridis PWY-6837 Setaria viridis pathologic  
Sviridis PWY-7036 Setaria viridis pathologic  
Sviridis PWY-735 Setaria viridis pathologic  
Sviridis PWY-7606 Setaria viridis pathologic  
Sviridis VALDEG-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G121000 0.5kb upstream 0.5kb upstream 8857 true Chr_01: 10500985-10509841 Setaria viridis
Sevir.1G121000 0.5kb upstream 0.5kb upstream 500 false Chr_01: 10500985-10501484 Setaria viridis
Sevir.1G121000 0.5kb downstream 0.5kb downstream 8857 true Chr_01: 10501485-10510341 Setaria viridis
Sevir.1G121000 0.5kb downstream 0.5kb downstream 500 false Chr_01: 10509842-10510341 Setaria viridis
Sevir.1G121000 1.0kb upstream 1.0kb upstream 9357 true Chr_01: 10500485-10509841 Setaria viridis
Sevir.1G121000 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 10500485-10501484 Setaria viridis
Sevir.1G121000 1.0kb downstream 1.0kb downstream 9357 true Chr_01: 10501485-10510841 Setaria viridis
Sevir.1G121000 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 10509842-10510841 Setaria viridis
Sevir.1G121000 2.0kb upstream 2.0kb upstream 10357 true Chr_01: 10499485-10509841 Setaria viridis
Sevir.1G121000 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 10499485-10501484 Setaria viridis
Sevir.1G121000 2.0kb downstream 2.0kb downstream 10357 true Chr_01: 10501485-10511841 Setaria viridis
Sevir.1G121000 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 10509842-10511841 Setaria viridis
Sevir.1G121000 5.0kb upstream 5.0kb upstream 13357 true Chr_01: 10496485-10509841 Setaria viridis
Sevir.1G121000 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 10496485-10501484 Setaria viridis
Sevir.1G121000 5.0kb downstream 5.0kb downstream 13357 true Chr_01: 10501485-10514841 Setaria viridis
Sevir.1G121000 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 10509842-10514841 Setaria viridis
Sevir.1G121000 10.0kb upstream 10.0kb upstream 18357 true Chr_01: 10491485-10509841 Setaria viridis
Sevir.1G121000 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 10491485-10501484 Setaria viridis
Sevir.1G121000 10.0kb downstream 10.0kb downstream 18357 true Chr_01: 10501485-10519841 Setaria viridis
Sevir.1G121000 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 10509842-10519841 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178064 5267 Panicoideae View MSA
124568788 5269 Grass View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain