Gene : Sevir.1G145572 S. viridis v2.1
Defline:  (1 of 4) PTHR11993 - NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT Genomic Order:  1626
Name:  ? Sevir.1G145572 Secondary Identifier:  ? PAC:40608120
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-3781 Setaria viridis pathologic  
Sviridis PWY-4302 Setaria viridis pathologic  
Sviridis PWY-5083 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G145572 0.5kb upstream 0.5kb upstream 791 true Chr_01: 16867040-16867830 Setaria viridis
Sevir.1G145572 0.5kb upstream 0.5kb upstream 500 false Chr_01: 16867040-16867539 Setaria viridis
Sevir.1G145572 0.5kb downstream 0.5kb downstream 791 true Chr_01: 16867540-16868330 Setaria viridis
Sevir.1G145572 0.5kb downstream 0.5kb downstream 500 false Chr_01: 16867831-16868330 Setaria viridis
Sevir.1G145572 1.0kb upstream 1.0kb upstream 1291 true Chr_01: 16866540-16867830 Setaria viridis
Sevir.1G145572 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 16866540-16867539 Setaria viridis
Sevir.1G145572 1.0kb downstream 1.0kb downstream 1291 true Chr_01: 16867540-16868830 Setaria viridis
Sevir.1G145572 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 16867831-16868830 Setaria viridis
Sevir.1G145572 2.0kb upstream 2.0kb upstream 2291 true Chr_01: 16865540-16867830 Setaria viridis
Sevir.1G145572 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 16865540-16867539 Setaria viridis
Sevir.1G145572 2.0kb downstream 2.0kb downstream 2291 true Chr_01: 16867540-16869830 Setaria viridis
Sevir.1G145572 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 16867831-16869830 Setaria viridis
Sevir.1G145572 5.0kb upstream 5.0kb upstream 5291 true Chr_01: 16862540-16867830 Setaria viridis
Sevir.1G145572 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 16862540-16867539 Setaria viridis
Sevir.1G145572 5.0kb downstream 5.0kb downstream 5291 true Chr_01: 16867540-16872830 Setaria viridis
Sevir.1G145572 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 16867831-16872830 Setaria viridis
Sevir.1G145572 10.0kb upstream 10.0kb upstream 10291 true Chr_01: 16857540-16867830 Setaria viridis
Sevir.1G145572 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 16857540-16867539 Setaria viridis
Sevir.1G145572 10.0kb downstream 10.0kb downstream 10291 true Chr_01: 16867540-16877830 Setaria viridis
Sevir.1G145572 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 16867831-16877830 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026692 5273 Angiosperm View MSA
122193272 5267 Panicoideae View MSA
124466485 5269 Grass View MSA
121350081 5274 Embryophyte View MSA
123381572 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain