Gene : Sevir.1G145540 S. viridis v2.1
Defline:  (1 of 1) K03879 - NADH-ubiquinone oxidoreductase chain 2 (ND2) Genomic Order:  1618
Name:  ? Sevir.1G145540 Secondary Identifier:  ? PAC:40609363
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-3781 Setaria viridis pathologic  
Sviridis PWY-4302 Setaria viridis pathologic  
Sviridis PWY-5083 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G145540 0.5kb upstream 0.5kb upstream 1094 true Chr_01: 16839427-16840520 Setaria viridis
Sevir.1G145540 0.5kb upstream 0.5kb upstream 500 false Chr_01: 16840021-16840520 Setaria viridis
Sevir.1G145540 0.5kb downstream 0.5kb downstream 1094 true Chr_01: 16838927-16840020 Setaria viridis
Sevir.1G145540 0.5kb downstream 0.5kb downstream 500 false Chr_01: 16838927-16839426 Setaria viridis
Sevir.1G145540 1.0kb upstream 1.0kb upstream 1594 true Chr_01: 16839427-16841020 Setaria viridis
Sevir.1G145540 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 16840021-16841020 Setaria viridis
Sevir.1G145540 1.0kb downstream 1.0kb downstream 1594 true Chr_01: 16838427-16840020 Setaria viridis
Sevir.1G145540 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 16838427-16839426 Setaria viridis
Sevir.1G145540 2.0kb upstream 2.0kb upstream 2594 true Chr_01: 16839427-16842020 Setaria viridis
Sevir.1G145540 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 16840021-16842020 Setaria viridis
Sevir.1G145540 2.0kb downstream 2.0kb downstream 2594 true Chr_01: 16837427-16840020 Setaria viridis
Sevir.1G145540 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 16837427-16839426 Setaria viridis
Sevir.1G145540 5.0kb upstream 5.0kb upstream 5594 true Chr_01: 16839427-16845020 Setaria viridis
Sevir.1G145540 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 16840021-16845020 Setaria viridis
Sevir.1G145540 5.0kb downstream 5.0kb downstream 5594 true Chr_01: 16834427-16840020 Setaria viridis
Sevir.1G145540 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 16834427-16839426 Setaria viridis
Sevir.1G145540 10.0kb upstream 10.0kb upstream 10594 true Chr_01: 16839427-16850020 Setaria viridis
Sevir.1G145540 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 16840021-16850020 Setaria viridis
Sevir.1G145540 10.0kb downstream 10.0kb downstream 10594 true Chr_01: 16829427-16840020 Setaria viridis
Sevir.1G145540 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 16829427-16839426 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199914 5267 Panicoideae View MSA
124582133 5269 Grass View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain