Gene : Sevir.1G068800 S. viridis v2.1
Defline:  (1 of 1) PTHR10739//PTHR10739:SF32 - CYTIDYLYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  764
Name:  ? Sevir.1G068800 Secondary Identifier:  ? PAC:40604999
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-3561 Setaria viridis pathologic  
Sviridis PWY3O-450 Setaria viridis pathologic  
Sviridis PWY4FS-2 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G068800 0.5kb upstream 0.5kb upstream 4345 true Chr_01: 6228011-6232355 Setaria viridis
Sevir.1G068800 0.5kb upstream 0.5kb upstream 500 false Chr_01: 6231856-6232355 Setaria viridis
Sevir.1G068800 0.5kb downstream 0.5kb downstream 4345 true Chr_01: 6227511-6231855 Setaria viridis
Sevir.1G068800 0.5kb downstream 0.5kb downstream 500 false Chr_01: 6227511-6228010 Setaria viridis
Sevir.1G068800 1.0kb upstream 1.0kb upstream 4845 true Chr_01: 6228011-6232855 Setaria viridis
Sevir.1G068800 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 6231856-6232855 Setaria viridis
Sevir.1G068800 1.0kb downstream 1.0kb downstream 4845 true Chr_01: 6227011-6231855 Setaria viridis
Sevir.1G068800 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 6227011-6228010 Setaria viridis
Sevir.1G068800 2.0kb upstream 2.0kb upstream 5845 true Chr_01: 6228011-6233855 Setaria viridis
Sevir.1G068800 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 6231856-6233855 Setaria viridis
Sevir.1G068800 2.0kb downstream 2.0kb downstream 5845 true Chr_01: 6226011-6231855 Setaria viridis
Sevir.1G068800 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 6226011-6228010 Setaria viridis
Sevir.1G068800 5.0kb upstream 5.0kb upstream 8845 true Chr_01: 6228011-6236855 Setaria viridis
Sevir.1G068800 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 6231856-6236855 Setaria viridis
Sevir.1G068800 5.0kb downstream 5.0kb downstream 8845 true Chr_01: 6223011-6231855 Setaria viridis
Sevir.1G068800 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 6223011-6228010 Setaria viridis
Sevir.1G068800 10.0kb upstream 10.0kb upstream 13845 true Chr_01: 6228011-6241855 Setaria viridis
Sevir.1G068800 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 6231856-6241855 Setaria viridis
Sevir.1G068800 10.0kb downstream 10.0kb downstream 13845 true Chr_01: 6218011-6231855 Setaria viridis
Sevir.1G068800 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 6218011-6228010 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189968 5267 Panicoideae View MSA
124569080 5269 Grass View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain