Gene : Sevir.1G261000 S. viridis v2.1
Defline:  (1 of 2) 4.2.1.18 - Methylglutaconyl-CoA hydratase Genomic Order:  2883
Name:  ? Sevir.1G261000 Secondary Identifier:  ? PAC:40607109
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis LEU-DEG2-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G261000 0.5kb upstream 0.5kb upstream 4565 true Chr_01: 32944446-32949010 Setaria viridis
Sevir.1G261000 0.5kb upstream 0.5kb upstream 500 false Chr_01: 32944446-32944945 Setaria viridis
Sevir.1G261000 0.5kb downstream 0.5kb downstream 4565 true Chr_01: 32944946-32949510 Setaria viridis
Sevir.1G261000 0.5kb downstream 0.5kb downstream 500 false Chr_01: 32949011-32949510 Setaria viridis
Sevir.1G261000 1.0kb upstream 1.0kb upstream 5065 true Chr_01: 32943946-32949010 Setaria viridis
Sevir.1G261000 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 32943946-32944945 Setaria viridis
Sevir.1G261000 1.0kb downstream 1.0kb downstream 5065 true Chr_01: 32944946-32950010 Setaria viridis
Sevir.1G261000 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 32949011-32950010 Setaria viridis
Sevir.1G261000 2.0kb upstream 2.0kb upstream 6065 true Chr_01: 32942946-32949010 Setaria viridis
Sevir.1G261000 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 32942946-32944945 Setaria viridis
Sevir.1G261000 2.0kb downstream 2.0kb downstream 6065 true Chr_01: 32944946-32951010 Setaria viridis
Sevir.1G261000 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 32949011-32951010 Setaria viridis
Sevir.1G261000 5.0kb upstream 5.0kb upstream 9065 true Chr_01: 32939946-32949010 Setaria viridis
Sevir.1G261000 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 32939946-32944945 Setaria viridis
Sevir.1G261000 5.0kb downstream 5.0kb downstream 9065 true Chr_01: 32944946-32954010 Setaria viridis
Sevir.1G261000 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 32949011-32954010 Setaria viridis
Sevir.1G261000 10.0kb upstream 10.0kb upstream 14065 true Chr_01: 32934946-32949010 Setaria viridis
Sevir.1G261000 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 32934946-32944945 Setaria viridis
Sevir.1G261000 10.0kb downstream 10.0kb downstream 14065 true Chr_01: 32944946-32959010 Setaria viridis
Sevir.1G261000 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 32949011-32959010 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994710 5273 Angiosperm View MSA
122195926 5267 Panicoideae View MSA
124585375 5269 Grass View MSA
121264927 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain