Gene : Sevir.1G262000 S. viridis v2.1
Defline:  (1 of 1) K01704 - 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit (leuD) Genomic Order:  2893
Name:  ? Sevir.1G262000 Secondary Identifier:  ? PAC:40607450
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis BRANCHED-CHAIN-AA-SYN-PWY Setaria viridis pathologic  
Sviridis LEUSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G262000 0.5kb upstream 0.5kb upstream 3550 true Chr_01: 32997792-33001341 Setaria viridis
Sevir.1G262000 0.5kb upstream 0.5kb upstream 500 false Chr_01: 33000842-33001341 Setaria viridis
Sevir.1G262000 0.5kb downstream 0.5kb downstream 3550 true Chr_01: 32997292-33000841 Setaria viridis
Sevir.1G262000 0.5kb downstream 0.5kb downstream 500 false Chr_01: 32997292-32997791 Setaria viridis
Sevir.1G262000 1.0kb upstream 1.0kb upstream 4050 true Chr_01: 32997792-33001841 Setaria viridis
Sevir.1G262000 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 33000842-33001841 Setaria viridis
Sevir.1G262000 1.0kb downstream 1.0kb downstream 4050 true Chr_01: 32996792-33000841 Setaria viridis
Sevir.1G262000 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 32996792-32997791 Setaria viridis
Sevir.1G262000 2.0kb upstream 2.0kb upstream 5050 true Chr_01: 32997792-33002841 Setaria viridis
Sevir.1G262000 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 33000842-33002841 Setaria viridis
Sevir.1G262000 2.0kb downstream 2.0kb downstream 5050 true Chr_01: 32995792-33000841 Setaria viridis
Sevir.1G262000 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 32995792-32997791 Setaria viridis
Sevir.1G262000 5.0kb upstream 5.0kb upstream 8050 true Chr_01: 32997792-33005841 Setaria viridis
Sevir.1G262000 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 33000842-33005841 Setaria viridis
Sevir.1G262000 5.0kb downstream 5.0kb downstream 8050 true Chr_01: 32992792-33000841 Setaria viridis
Sevir.1G262000 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 32992792-32997791 Setaria viridis
Sevir.1G262000 10.0kb upstream 10.0kb upstream 13050 true Chr_01: 32997792-33010841 Setaria viridis
Sevir.1G262000 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 33000842-33010841 Setaria viridis
Sevir.1G262000 10.0kb downstream 10.0kb downstream 13050 true Chr_01: 32987792-33000841 Setaria viridis
Sevir.1G262000 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 32987792-32997791 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040980 5273 Angiosperm View MSA
122184259 5267 Panicoideae View MSA
124584130 5269 Grass View MSA
121345878 5274 Embryophyte View MSA
123423763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain