Gene : Sevir.1G177300 S. viridis v2.1
Defline:  (1 of 2) PTHR11062//PTHR11062:SF85 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  1968
Name:  ? Sevir.1G177300 Secondary Identifier:  ? PAC:40606784
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5980 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G177300 0.5kb upstream 0.5kb upstream 2260 true Chr_01: 25118876-25121135 Setaria viridis
Sevir.1G177300 0.5kb upstream 0.5kb upstream 500 false Chr_01: 25118876-25119375 Setaria viridis
Sevir.1G177300 0.5kb downstream 0.5kb downstream 2260 true Chr_01: 25119376-25121635 Setaria viridis
Sevir.1G177300 0.5kb downstream 0.5kb downstream 500 false Chr_01: 25121136-25121635 Setaria viridis
Sevir.1G177300 1.0kb upstream 1.0kb upstream 2760 true Chr_01: 25118376-25121135 Setaria viridis
Sevir.1G177300 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 25118376-25119375 Setaria viridis
Sevir.1G177300 1.0kb downstream 1.0kb downstream 2760 true Chr_01: 25119376-25122135 Setaria viridis
Sevir.1G177300 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 25121136-25122135 Setaria viridis
Sevir.1G177300 2.0kb upstream 2.0kb upstream 3760 true Chr_01: 25117376-25121135 Setaria viridis
Sevir.1G177300 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 25117376-25119375 Setaria viridis
Sevir.1G177300 2.0kb downstream 2.0kb downstream 3760 true Chr_01: 25119376-25123135 Setaria viridis
Sevir.1G177300 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 25121136-25123135 Setaria viridis
Sevir.1G177300 5.0kb upstream 5.0kb upstream 6760 true Chr_01: 25114376-25121135 Setaria viridis
Sevir.1G177300 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 25114376-25119375 Setaria viridis
Sevir.1G177300 5.0kb downstream 5.0kb downstream 6760 true Chr_01: 25119376-25126135 Setaria viridis
Sevir.1G177300 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 25121136-25126135 Setaria viridis
Sevir.1G177300 10.0kb upstream 10.0kb upstream 11760 true Chr_01: 25109376-25121135 Setaria viridis
Sevir.1G177300 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 25109376-25119375 Setaria viridis
Sevir.1G177300 10.0kb downstream 10.0kb downstream 11760 true Chr_01: 25119376-25131135 Setaria viridis
Sevir.1G177300 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 25121136-25131135 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031438 5273 Angiosperm View MSA
122198707 5267 Panicoideae View MSA
124467737 5269 Grass View MSA
121300480 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain