Gene : Sevir.1G192600 S. viridis v2.1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF26 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2129
Name:  ? Sevir.1G192600 Secondary Identifier:  ? PAC:40607795
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G192600 0.5kb upstream 0.5kb upstream 2945 true Chr_01: 26955118-26958062 Setaria viridis
Sevir.1G192600 0.5kb upstream 0.5kb upstream 500 false Chr_01: 26957563-26958062 Setaria viridis
Sevir.1G192600 0.5kb downstream 0.5kb downstream 2945 true Chr_01: 26954618-26957562 Setaria viridis
Sevir.1G192600 0.5kb downstream 0.5kb downstream 500 false Chr_01: 26954618-26955117 Setaria viridis
Sevir.1G192600 1.0kb upstream 1.0kb upstream 3445 true Chr_01: 26955118-26958562 Setaria viridis
Sevir.1G192600 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 26957563-26958562 Setaria viridis
Sevir.1G192600 1.0kb downstream 1.0kb downstream 3445 true Chr_01: 26954118-26957562 Setaria viridis
Sevir.1G192600 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 26954118-26955117 Setaria viridis
Sevir.1G192600 2.0kb upstream 2.0kb upstream 4445 true Chr_01: 26955118-26959562 Setaria viridis
Sevir.1G192600 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 26957563-26959562 Setaria viridis
Sevir.1G192600 2.0kb downstream 2.0kb downstream 4445 true Chr_01: 26953118-26957562 Setaria viridis
Sevir.1G192600 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 26953118-26955117 Setaria viridis
Sevir.1G192600 5.0kb upstream 5.0kb upstream 7445 true Chr_01: 26955118-26962562 Setaria viridis
Sevir.1G192600 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 26957563-26962562 Setaria viridis
Sevir.1G192600 5.0kb downstream 5.0kb downstream 7445 true Chr_01: 26950118-26957562 Setaria viridis
Sevir.1G192600 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 26950118-26955117 Setaria viridis
Sevir.1G192600 10.0kb upstream 10.0kb upstream 12445 true Chr_01: 26955118-26967562 Setaria viridis
Sevir.1G192600 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 26957563-26967562 Setaria viridis
Sevir.1G192600 10.0kb downstream 10.0kb downstream 12445 true Chr_01: 26945118-26957562 Setaria viridis
Sevir.1G192600 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 26945118-26955117 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188628 5267 Panicoideae View MSA
124578185 5269 Grass View MSA
122045522 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain