Gene : Sevir.1G182200 S. viridis v2.1
Defline:  (1 of 1) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  2024
Name:  ? Sevir.1G182200 Secondary Identifier:  ? PAC:40604513
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5936 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G182200 0.5kb upstream 0.5kb upstream 3919 true Chr_01: 25767047-25770965 Setaria viridis
Sevir.1G182200 0.5kb upstream 0.5kb upstream 500 false Chr_01: 25770466-25770965 Setaria viridis
Sevir.1G182200 0.5kb downstream 0.5kb downstream 3919 true Chr_01: 25766547-25770465 Setaria viridis
Sevir.1G182200 0.5kb downstream 0.5kb downstream 500 false Chr_01: 25766547-25767046 Setaria viridis
Sevir.1G182200 1.0kb upstream 1.0kb upstream 4419 true Chr_01: 25767047-25771465 Setaria viridis
Sevir.1G182200 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 25770466-25771465 Setaria viridis
Sevir.1G182200 1.0kb downstream 1.0kb downstream 4419 true Chr_01: 25766047-25770465 Setaria viridis
Sevir.1G182200 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 25766047-25767046 Setaria viridis
Sevir.1G182200 2.0kb upstream 2.0kb upstream 5419 true Chr_01: 25767047-25772465 Setaria viridis
Sevir.1G182200 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 25770466-25772465 Setaria viridis
Sevir.1G182200 2.0kb downstream 2.0kb downstream 5419 true Chr_01: 25765047-25770465 Setaria viridis
Sevir.1G182200 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 25765047-25767046 Setaria viridis
Sevir.1G182200 5.0kb upstream 5.0kb upstream 8419 true Chr_01: 25767047-25775465 Setaria viridis
Sevir.1G182200 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 25770466-25775465 Setaria viridis
Sevir.1G182200 5.0kb downstream 5.0kb downstream 8419 true Chr_01: 25762047-25770465 Setaria viridis
Sevir.1G182200 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 25762047-25767046 Setaria viridis
Sevir.1G182200 10.0kb upstream 10.0kb upstream 13419 true Chr_01: 25767047-25780465 Setaria viridis
Sevir.1G182200 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 25770466-25780465 Setaria viridis
Sevir.1G182200 10.0kb downstream 10.0kb downstream 13419 true Chr_01: 25757047-25770465 Setaria viridis
Sevir.1G182200 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 25757047-25767046 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188249 5267 Panicoideae View MSA
124583010 5269 Grass View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain