Gene : Sevir.1G231300 S. viridis v2.1

Defline:  (1 of 1) PTHR30239//PTHR30239:SF5 - ACETOLACTATE SYNTHASE III, REGULATORY SUBUNIT // SUBFAMILY NOT NAMED Genomic Order:  2552
Name:  ? Sevir.1G231300 Secondary Identifier:  ? PAC:40607335

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis BRANCHED-CHAIN-AA-SYN-PWY Setaria viridis pathologic  
Sviridis ILEUSYN-PWY Setaria viridis pathologic  
Sviridis PWY-3001 Setaria viridis pathologic  
Sviridis VALSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.1G231300 0.5kb upstream 0.5kb upstream 6421 true Chr_01: 30306738-30313158 Setaria viridis
Sevir.1G231300 0.5kb upstream 0.5kb upstream 500 false Chr_01: 30306738-30307237 Setaria viridis
Sevir.1G231300 0.5kb downstream 0.5kb downstream 6421 true Chr_01: 30307238-30313658 Setaria viridis
Sevir.1G231300 0.5kb downstream 0.5kb downstream 500 false Chr_01: 30313159-30313658 Setaria viridis
Sevir.1G231300 1.0kb upstream 1.0kb upstream 6921 true Chr_01: 30306238-30313158 Setaria viridis
Sevir.1G231300 1.0kb upstream 1.0kb upstream 1000 false Chr_01: 30306238-30307237 Setaria viridis
Sevir.1G231300 1.0kb downstream 1.0kb downstream 6921 true Chr_01: 30307238-30314158 Setaria viridis
Sevir.1G231300 1.0kb downstream 1.0kb downstream 1000 false Chr_01: 30313159-30314158 Setaria viridis
Sevir.1G231300 2.0kb upstream 2.0kb upstream 7921 true Chr_01: 30305238-30313158 Setaria viridis
Sevir.1G231300 2.0kb upstream 2.0kb upstream 2000 false Chr_01: 30305238-30307237 Setaria viridis
Sevir.1G231300 2.0kb downstream 2.0kb downstream 7921 true Chr_01: 30307238-30315158 Setaria viridis
Sevir.1G231300 2.0kb downstream 2.0kb downstream 2000 false Chr_01: 30313159-30315158 Setaria viridis
Sevir.1G231300 5.0kb upstream 5.0kb upstream 10921 true Chr_01: 30302238-30313158 Setaria viridis
Sevir.1G231300 5.0kb upstream 5.0kb upstream 5000 false Chr_01: 30302238-30307237 Setaria viridis
Sevir.1G231300 5.0kb downstream 5.0kb downstream 10921 true Chr_01: 30307238-30318158 Setaria viridis
Sevir.1G231300 5.0kb downstream 5.0kb downstream 5000 false Chr_01: 30313159-30318158 Setaria viridis
Sevir.1G231300 10.0kb upstream 10.0kb upstream 15921 true Chr_01: 30297238-30313158 Setaria viridis
Sevir.1G231300 10.0kb upstream 10.0kb upstream 10000 false Chr_01: 30297238-30307237 Setaria viridis
Sevir.1G231300 10.0kb downstream 10.0kb downstream 15921 true Chr_01: 30307238-30323158 Setaria viridis
Sevir.1G231300 10.0kb downstream 10.0kb downstream 10000 false Chr_01: 30313159-30323158 Setaria viridis

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041401 5273 Angiosperm View MSA
122178591 5267 Panicoideae View MSA
124576273 5269 Grass View MSA
121347297 5274 Embryophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain